Detailed information NTG1004776

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: ABI116_RS17200
• Genome accession: NZ_CP157214
• Coordinates: 3252366..3253010 (-)
• Length: 214 a.a.
• NCBI ID: WP_003220716.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis isolate FELIX_MS21
• Function: promoting transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 3247366..3258010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABI116_RS17165 (ABI116_17165)	mrpB	3248558..3248989 (+)	432	WP_003228819.1	Na(+)/H(+) antiporter subunit B	-
ABI116_RS17170 (ABI116_17170)	mrpC	3248989..3249330 (+)	342	WP_003220730.1	Na(+)/H(+) antiporter subunit C	-
ABI116_RS17175 (ABI116_17175)	mrpD	3249323..3250804 (+)	1482	WP_003244432.1	Na+/H+ antiporter subunit D	-
ABI116_RS17180 (ABI116_17180)	mrpE	3250810..3251286 (+)	477	WP_003244015.1	Na+/H+ antiporter subunit E	-
ABI116_RS17185 (ABI116_17185)	mrpF	3251286..3251570 (+)	285	WP_003228814.1	Na(+)/H(+) antiporter subunit F1	-
ABI116_RS17190 (ABI116_17190)	mnhG	3251554..3251928 (+)	375	WP_003244302.1	monovalent cation/H(+) antiporter subunit G	-
ABI116_RS17195 (ABI116_17195)	yuxO	3251967..3252347 (-)	381	WP_003228810.1	hotdog fold thioesterase	-
ABI116_RS17200 (ABI116_17200)	comA	3252366..3253010 (-)	645	WP_003220716.1	two-component system response regulator ComA	Regulator
ABI116_RS17205 (ABI116_17205)	comP	3253091..3255400 (-)	2310	WP_032723438.1	two-component system sensor histidine kinase ComP	Regulator
ABI116_RS17210 (ABI116_17210)	comX	3255415..3255582 (-)	168	WP_003242801.1	competence pheromone ComX	Regulator
ABI116_RS17215 (ABI116_17215)	comQ	3255570..3256469 (-)	900	WP_003243039.1	ComX modifying isoprenyl transferase ComQ	Regulator
ABI116_RS17220 (ABI116_17220)	degQ	3256654..3256794 (-)	141	WP_003220708.1	degradation enzyme regulation protein DegQ	Regulator
ABI116_RS17225 (ABI116_17225)	-	3257016..3257141 (+)	126	WP_003228793.1	hypothetical protein	-
ABI116_RS17230 (ABI116_17230)	-	3257255..3257623 (+)	369	WP_003243784.1	hypothetical protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24128.51 Da
• Isoelectric Point: 4.6857

>NTDB_id=1004776 ABI116_RS17200 WP_003220716.1 3252366..3253010(-) (comA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS21]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide

• Length: 645 bp

>NTDB_id=1004776 ABI116_RS17200 WP_003220716.1 3252366..3253010(-) (comA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS21]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, luxR family (GerE) (152-208)

• Response regulator receiver domain (Response_reg) (4-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Bacillus subtilis subsp. subtilis str. 168	100	100	1