Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FGK91_RS07285 Genome accession   NZ_LR590483
Coordinates   1410131..1411165 (-) Length   344 a.a.
NCBI ID   WP_023078705.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8318     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1405131..1416165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK91_RS07250 (NCTC8318_01449) - 1405907..1406209 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  FGK91_RS07255 (NCTC8318_01450) - 1406202..1406498 (-) 297 WP_002983486.1 YlxR family protein -
  FGK91_RS07260 (NCTC8318_01451) nusA 1406514..1407671 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  FGK91_RS07265 (NCTC8318_01452) rimP 1407846..1408382 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  FGK91_RS07275 (NCTC8318_01454) trmB 1408641..1409276 (-) 636 WP_023078685.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGK91_RS07280 (NCTC8318_01455) - 1409276..1410067 (-) 792 WP_002983385.1 phosphotransferase family protein -
  FGK91_RS07285 (NCTC8318_01456) pptB 1410131..1411165 (-) 1035 WP_023078705.1 ABC transporter permease Regulator
  FGK91_RS07290 (NCTC8318_01457) pptA 1411168..1411893 (-) 726 WP_023078675.1 ABC transporter ATP-binding protein Regulator
  FGK91_RS07295 (NCTC8318_01458) - 1411965..1412384 (+) 420 WP_002983376.1 HIT family protein -
  FGK91_RS07300 (NCTC8318_01459) - 1412381..1412737 (+) 357 WP_009880754.1 hypothetical protein -
  FGK91_RS07305 (NCTC8318_01460) - 1412848..1414122 (-) 1275 WP_020837594.1 LCP family protein -
  FGK91_RS07310 (NCTC8318_01461) - 1414131..1414655 (-) 525 WP_023078656.1 N-acetyltransferase -
  FGK91_RS07315 (NCTC8318_01462) tsaE 1414630..1415091 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40265.51 Da        Isoelectric Point: 10.3713

>NTDB_id=1004764 FGK91_RS07285 WP_023078705.1 1410131..1411165(-) (pptB) [Streptococcus pyogenes strain NCTC8318]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNQFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1004764 FGK91_RS07285 WP_023078705.1 1410131..1411165(-) (pptB) [Streptococcus pyogenes strain NCTC8318]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCAGTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

42.733

100

0.427

  pptB Streptococcus salivarius strain HSISS4

42.442

100

0.424


Multiple sequence alignment