Detailed information NTG1004658

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ABI122_RS25880
• Genome accession: NZ_CP157205
• Coordinates: 5017169..5018518 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225362.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain 9.1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5012169..5023518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABI122_RS25860 (ABI122_25860)	secA	5012494..5015001 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
ABI122_RS25865 (ABI122_25865)	raiA	5015276..5015818 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
ABI122_RS25870 (ABI122_25870)	cspC	5016141..5016338 (-)	198	WP_001990088.1	cold shock protein CspC	-
ABI122_RS25875 (ABI122_25875)	-	5016465..5017169 (-)	705	WP_013142274.1	ComF family protein	-
ABI122_RS25880 (ABI122_25880)	comFA	5017169..5018518 (-)	1350	WP_000225362.1	ATP-dependent helicase ComFA	Machinery gene
ABI122_RS25885 (ABI122_25885)	-	5018645..5020090 (-)	1446	WP_000499477.1	C40 family peptidase	-
ABI122_RS25890 (ABI122_25890)	-	5020245..5020559 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
ABI122_RS25895 (ABI122_25895)	-	5020732..5021574 (-)	843	WP_000684725.1	DegV family protein	-
ABI122_RS25900 (ABI122_25900)	-	5021811..5022446 (+)	636	WP_000926672.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51174.04 Da
• Isoelectric Point: 9.9910

>NTDB_id=1004658 ABI122_RS25880 WP_000225362.1 5017169..5018518(-) (comFA) [Bacillus thuringiensis strain 9.1]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=1004658 ABI122_RS25880 WP_000225362.1 5017169..5018518(-) (comFA) [Bacillus thuringiensis strain 9.1]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49