Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAG688_RS04685 Genome accession   NZ_CP157201
Coordinates   1045070..1045471 (+) Length   133 a.a.
NCBI ID   WP_411834200.1    Uniprot ID   -
Organism   Pseudoxanthomonas mexicana strain SDU_PSEU2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1040070..1050471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAG688_RS04665 tsaB 1042112..1042807 (+) 696 WP_411834197.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  AAG688_RS04670 - 1042856..1043008 (+) 153 Protein_915 S26 family signal peptidase -
  AAG688_RS04675 - 1043026..1043898 (-) 873 WP_411834198.1 energy transducer TonB -
  AAG688_RS04680 gshB 1043900..1044847 (-) 948 WP_411834199.1 glutathione synthase -
  AAG688_RS04685 pilG 1045070..1045471 (+) 402 WP_411834200.1 response regulator Regulator
  AAG688_RS04690 - 1045527..1046060 (+) 534 WP_411834932.1 chemotaxis protein CheW -
  AAG688_RS04695 - 1046097..1048133 (+) 2037 WP_411834201.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14746.99 Da        Isoelectric Point: 6.9543

>NTDB_id=1004573 AAG688_RS04685 WP_411834200.1 1045070..1045471(+) (pilG) [Pseudoxanthomonas mexicana strain SDU_PSEU2]
MTQNEGQAGGLNGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
NNQVFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRAHVST

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1004573 AAG688_RS04685 WP_411834200.1 1045070..1045471(+) (pilG) [Pseudoxanthomonas mexicana strain SDU_PSEU2]
ATGACGCAGAACGAAGGCCAGGCCGGCGGACTCAACGGCCTCCGGGTCATGGTGATCGATGATTCGAAAACCATCCGCCG
CACCGCGGAGACCCTGCTAAAACGCGAAGGCTGCGAGGTGGTCACCGCGACGGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGACCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCGCGCCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
AACAACCAGGTCTTCAAGTCCACGCCGGTCATCATGCTCTCGTCCAAGGACGGCCTGTTCGACAAGGCCCGCGGACGGAT
CGTCGGTTCGGAGCAGTACCTGACCAAGCCTTTCACGCGCGAGGAGTTGCTGGACGCCATCCGCGCGCACGTCAGTACCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

93.233

0.699

Multiple sequence alignment