Detailed information NTG1004108

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: ABH595_RS17235
• Genome accession: NZ_CP157084
• Coordinates: 3261463..3262107 (-)
• Length: 214 a.a.
• NCBI ID: WP_003220716.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis isolate FELIX_MS9
• Function: promoting transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 3256463..3267107

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH595_RS17200 (ABH595_17200)	mrpB	3257655..3258086 (+)	432	WP_003228819.1	Na(+)/H(+) antiporter subunit B	-
ABH595_RS17205 (ABH595_17205)	mrpC	3258086..3258427 (+)	342	WP_003220730.1	Na(+)/H(+) antiporter subunit C	-
ABH595_RS17210 (ABH595_17210)	mrpD	3258420..3259901 (+)	1482	WP_003244432.1	Na+/H+ antiporter subunit D	-
ABH595_RS17215 (ABH595_17215)	mrpE	3259907..3260383 (+)	477	WP_003244015.1	Na+/H+ antiporter subunit E	-
ABH595_RS17220 (ABH595_17220)	mrpF	3260383..3260667 (+)	285	WP_003228814.1	Na(+)/H(+) antiporter subunit F1	-
ABH595_RS17225 (ABH595_17225)	mnhG	3260651..3261025 (+)	375	WP_003244302.1	monovalent cation/H(+) antiporter subunit G	-
ABH595_RS17230 (ABH595_17230)	yuxO	3261064..3261444 (-)	381	WP_003228810.1	hotdog fold thioesterase	-
ABH595_RS17235 (ABH595_17235)	comA	3261463..3262107 (-)	645	WP_003220716.1	two-component system response regulator ComA	Regulator
ABH595_RS17240 (ABH595_17240)	comP	3262188..3264497 (-)	2310	WP_003242894.1	two-component system sensor histidine kinase ComP	Regulator
ABH595_RS17245 (ABH595_17245)	comX	3264512..3264679 (-)	168	WP_003242801.1	competence pheromone ComX	Regulator
ABH595_RS17250 (ABH595_17250)	comQ	3264667..3265566 (-)	900	WP_003243039.1	ComX modifying isoprenyl transferase ComQ	Regulator
ABH595_RS17255 (ABH595_17255)	degQ	3265751..3265891 (-)	141	WP_003220708.1	degradation enzyme regulation protein DegQ	Regulator
ABH595_RS17260 (ABH595_17260)	-	3266113..3266238 (+)	126	WP_003228793.1	hypothetical protein	-
ABH595_RS17265 (ABH595_17265)	-	3266352..3266720 (+)	369	WP_003243784.1	hypothetical protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24128.51 Da
• Isoelectric Point: 4.6857

>NTDB_id=1004108 ABH595_RS17235 WP_003220716.1 3261463..3262107(-) (comA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS9]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide

• Length: 645 bp

>NTDB_id=1004108 ABH595_RS17235 WP_003220716.1 3261463..3262107(-) (comA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS9]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, luxR family (GerE) (152-208)

• Response regulator receiver domain (Response_reg) (4-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Bacillus subtilis subsp. subtilis str. 168	100	100	1