Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABGT20_RS06225 Genome accession   NZ_CP157038
Coordinates   1198879..1199070 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain AR01-03     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1193879..1204070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABGT20_RS06200 (ABGT20_06200) yjzC 1195788..1195967 (+) 180 WP_003245356.1 YjzC family protein -
  ABGT20_RS06205 (ABGT20_06205) yjzD 1196013..1196198 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  ABGT20_RS06210 (ABGT20_06210) - 1196447..1197181 (+) 735 WP_014479433.1 hypothetical protein -
  ABGT20_RS06215 (ABGT20_06215) - 1197263..1197820 (+) 558 WP_014479435.1 hypothetical protein -
  ABGT20_RS06220 (ABGT20_06220) med 1197911..1198864 (+) 954 WP_014479436.1 transcriptional regulator Med Regulator
  ABGT20_RS06225 (ABGT20_06225) comZ 1198879..1199070 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ABGT20_RS06230 (ABGT20_06230) yjzB 1199100..1199327 (-) 228 WP_031600361.1 spore coat protein YjzB -
  ABGT20_RS06235 (ABGT20_06235) fabH 1199492..1200430 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ABGT20_RS06240 (ABGT20_06240) fabF 1200453..1201694 (+) 1242 WP_014479438.1 beta-ketoacyl-ACP synthase II -
  ABGT20_RS06245 (ABGT20_06245) yjaZ 1201770..1202555 (+) 786 WP_014479439.1 DUF2268 domain-containing protein -
  ABGT20_RS06250 (ABGT20_06250) appD 1202747..1203733 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1003867 ABGT20_RS06225 WP_003224559.1 1198879..1199070(+) (comZ) [Bacillus subtilis strain AR01-03]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1003867 ABGT20_RS06225 WP_003224559.1 1198879..1199070(+) (comZ) [Bacillus subtilis strain AR01-03]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment