Detailed information NTG1003866

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABGT20_RS06220
• Genome accession: NZ_CP157038
• Coordinates: 1197911..1198864 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain AR01-03
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1192911..1203864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABGT20_RS06190 (ABGT20_06190)	argF	1193453..1194412 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
ABGT20_RS06200 (ABGT20_06200)	yjzC	1195788..1195967 (+)	180	WP_003245356.1	YjzC family protein	-
ABGT20_RS06205 (ABGT20_06205)	yjzD	1196013..1196198 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
ABGT20_RS06210 (ABGT20_06210)	-	1196447..1197181 (+)	735	WP_014479433.1	hypothetical protein	-
ABGT20_RS06215 (ABGT20_06215)	-	1197263..1197820 (+)	558	WP_014479435.1	hypothetical protein	-
ABGT20_RS06220 (ABGT20_06220)	med	1197911..1198864 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
ABGT20_RS06225 (ABGT20_06225)	comZ	1198879..1199070 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ABGT20_RS06230 (ABGT20_06230)	yjzB	1199100..1199327 (-)	228	WP_031600361.1	spore coat protein YjzB	-
ABGT20_RS06235 (ABGT20_06235)	fabH	1199492..1200430 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ABGT20_RS06240 (ABGT20_06240)	fabF	1200453..1201694 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
ABGT20_RS06245 (ABGT20_06245)	yjaZ	1201770..1202555 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
ABGT20_RS06250 (ABGT20_06250)	appD	1202747..1203733 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=1003866 ABGT20_RS06220 WP_014479436.1 1197911..1198864(+) (med) [Bacillus subtilis strain AR01-03]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1003866 ABGT20_RS06220 WP_014479436.1 1197911..1198864(+) (med) [Bacillus subtilis strain AR01-03]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994