Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | SA268_RS00315 | Genome accession | NZ_CP006630 |
| Coordinates | 71933..72346 (+) | Length | 137 a.a. |
| NCBI ID | WP_000998780.1 | Uniprot ID | C1PH97 |
| Organism | Staphylococcus aureus subsp. aureus SA268 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 66933..77346
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA268_RS00295 (SA268_0060) | - | 66936..68222 (+) | 1287 | WP_000513494.1 | SIR2 family protein | - |
| SA268_RS15455 (SA268_0061) | - | 68228..69157 (+) | 930 | WP_014363367.1 | helicase HerA domain-containing protein | - |
| SA268_RS15460 (SA268_0062) | - | 69154..69915 (+) | 762 | WP_014363368.1 | ATP-binding protein | - |
| SA268_RS15375 | - | 70076..70213 (+) | 138 | WP_021758025.1 | hypothetical protein | - |
| SA268_RS15465 (SA268_0063) | - | 70476..70670 (+) | 195 | WP_000856595.1 | hypothetical protein | - |
| SA268_RS00305 (SA268_0064) | - | 70622..71086 (+) | 465 | WP_014363369.1 | hypothetical protein | - |
| SA268_RS00310 (SA268_0065) | - | 71425..71832 (-) | 408 | WP_000173401.1 | hypothetical protein | - |
| SA268_RS00315 (SA268_0066) | lrpC | 71933..72346 (+) | 414 | WP_000998780.1 | Lrp/AsnC family transcriptional regulator | Machinery gene |
| SA268_RS00320 (SA268_0067) | - | 72408..72881 (+) | 474 | WP_000455975.1 | GNAT family N-acetyltransferase | - |
| SA268_RS00325 (SA268_0068) | - | 72989..73975 (-) | 987 | WP_000662031.1 | tRNA dihydrouridine synthase | - |
| SA268_RS00330 | - | 74283..74486 (+) | 204 | WP_000389759.1 | DUF6007 family protein | - |
| SA268_RS00335 (SA268_0069) | - | 74535..74831 (+) | 297 | WP_000179901.1 | TfoX/Sxy family protein | - |
| SA268_RS00340 (SA268_0070) | - | 74893..76113 (-) | 1221 | WP_000130756.1 | MFS transporter | - |
| SA268_RS00345 (SA268_0071) | - | 76106..76657 (-) | 552 | WP_000627025.1 | flavodoxin family protein | - |
| SA268_RS00350 (SA268_0072) | - | 76770..77282 (+) | 513 | Protein_70 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15971.29 Da Isoelectric Point: 4.6692
>NTDB_id=100385 SA268_RS00315 WP_000998780.1 71933..72346(+) (lrpC) [Staphylococcus aureus subsp. aureus SA268]
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
Nucleotide
Download Length: 414 bp
>NTDB_id=100385 SA268_RS00315 WP_000998780.1 71933..72346(+) (lrpC) [Staphylococcus aureus subsp. aureus SA268]
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
43.284 |
97.81 |
0.423 |