Detailed information NTG1003693

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: E0F32_RS00200
• Genome accession: NZ_LR216050
• Coordinates: 25936..26829 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 20936..31829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F32_RS00165 (SAMEA3431333_00033)	-	21249..22418 (+)	1170	WP_050222317.1	pyridoxal phosphate-dependent aminotransferase	-
E0F32_RS00170 (SAMEA3431333_00034)	recO	22415..23185 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
E0F32_RS00175 (SAMEA3431333_00035)	plsX	23182..24174 (+)	993	WP_061365540.1	phosphate acyltransferase PlsX	-
E0F32_RS00180 (SAMEA3431333_00036)	-	24180..24413 (+)	234	WP_000136447.1	acyl carrier protein	-
E0F32_RS00185 (SAMEA3431333_00037)	-	24450..24749 (+)	300	Protein_34	transposase family protein	-
E0F32_RS00190 (SAMEA3431333_00038)	blpU	24952..25182 (+)	231	WP_001093076.1	bacteriocin-like peptide BlpU	-
E0F32_RS12100	-	25185..25310 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
E0F32_RS11710	-	25721..25915 (+)	195	WP_000756776.1	hypothetical protein	-
E0F32_RS00200 (SAMEA3431333_00039)	comR	25936..26829 (+)	894	WP_000343888.1	helix-turn-helix domain-containing protein	Regulator
E0F32_RS00205 (SAMEA3431333_00040)	-	27359..27655 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
E0F32_RS00210 (SAMEA3431333_00041)	-	27662..28798 (+)	1137	WP_130885906.1	hypothetical protein	-
E0F32_RS00215 (SAMEA3431333_00042)	-	28795..29277 (+)	483	WP_001232094.1	stage II sporulation protein M	-
E0F32_RS00220 (SAMEA3431333_00043)	-	29274..29870 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
E0F32_RS00225 (SAMEA3431333_00044)	-	29851..30342 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=1003693 E0F32_RS00200 WP_000343888.1 25936..26829(+) (comR) [Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=1003693 E0F32_RS00200 WP_000343888.1 25936..26829(+) (comR) [Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37