Detailed information NTG1003692

Bioinformatically predicted

Overview

• Name: recO
• Type: Machinery gene
• Locus tag: E0F32_RS00170
• Genome accession: NZ_LR216050
• Coordinates: 22415..23185 (+)
• Length: 256 a.a.
• NCBI ID: WP_000616164.1
• Uniprot ID: Q97TA7
• Organism: Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 17415..28185

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F32_RS00150 (SAMEA3431333_00030)	-	19380..19817 (+)	438	WP_000076479.1	CoA-binding protein	-
E0F32_RS11705 (SAMEA3431333_00031)	-	19858..20061 (+)	204	WP_050220376.1	hypothetical protein	-
E0F32_RS00160 (SAMEA3431333_00032)	-	20090..21100 (-)	1011	WP_000009141.1	YeiH family protein	-
E0F32_RS00165 (SAMEA3431333_00033)	-	21249..22418 (+)	1170	WP_050222317.1	pyridoxal phosphate-dependent aminotransferase	-
E0F32_RS00170 (SAMEA3431333_00034)	recO	22415..23185 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
E0F32_RS00175 (SAMEA3431333_00035)	plsX	23182..24174 (+)	993	WP_061365540.1	phosphate acyltransferase PlsX	-
E0F32_RS00180 (SAMEA3431333_00036)	-	24180..24413 (+)	234	WP_000136447.1	acyl carrier protein	-
E0F32_RS00185 (SAMEA3431333_00037)	-	24450..24749 (+)	300	Protein_34	transposase family protein	-
E0F32_RS00190 (SAMEA3431333_00038)	blpU	24952..25182 (+)	231	WP_001093076.1	bacteriocin-like peptide BlpU	-
E0F32_RS12100	-	25185..25310 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
E0F32_RS11710	-	25721..25915 (+)	195	WP_000756776.1	hypothetical protein	-
E0F32_RS00200 (SAMEA3431333_00039)	comR	25936..26829 (+)	894	WP_000343888.1	helix-turn-helix domain-containing protein	Regulator
E0F32_RS00205 (SAMEA3431333_00040)	-	27359..27655 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-

Sequence

Protein

• Length: 256 a.a.
• Molecular weight: 29787.35 Da
• Isoelectric Point: 5.8959

>NTDB_id=1003692 E0F32_RS00170 WP_000616164.1 22415..23185(+) (recO) [Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505]
MIQSITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRINDDGLSYIEDYHEVMTFP
KINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELMEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVG
QAFDFSFKYGACLCPEHYHEDKRRCHLNPNIPYLLNQFQAIDFETLETISLKPGIKQELRQFMDQLYEEYVGIHLKSKKF
IDSLADWGQLLKEEKK

Nucleotide

• Length: 771 bp

>NTDB_id=1003692 E0F32_RS00170 WP_000616164.1 22415..23185(+) (recO) [Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505]
ATGATTCAGTCTATCACGAGTCAAGGCTTGGTGCTTTACAATCGCAATTTTCGTGAGGATGACAAGCTCGTCAAAATTTT
TACAGAGCAGGTTGGCAAACGCATGTTTTTTGTCAAACACGCTGGTCAGTCTAAGCTGGCGCCTGTTATTCAGCCCTTGG
TGCTGGCACGATTTCTCTTGCGAATCAATGATGACGGACTCAGTTACATCGAAGACTATCATGAGGTCATGACTTTTCCC
AAGATTAATAGTGACCTCTTTGTCATGGCCTATGCGACCTATGTGGCAGCTCTTGCAGATGCTAGTTTGCAGGACAATCA
GCAGGATGCTCCCTTGTTTGCTTTTTTGCAAAAGACTTTGGAGTTGATGGAAGCAGGCTTGGATTATCAGGTTTTGACCA
ATATTTTTGAAATTCAAATTTTGACTCGATTTGGAATCAGCCTCAATTTTAATGAGTGTGTCTTCTGCCATCGGGTTGGT
CAGGCTTTTGACTTTTCTTTCAAATATGGAGCCTGCCTCTGTCCAGAGCATTATCATGAGGATAAGAGACGTTGTCATCT
CAATCCCAATATCCCCTATCTGCTCAATCAATTTCAAGCTATTGATTTTGAGACTTTGGAGACCATTTCGCTCAAGCCTG
GAATCAAGCAAGAGCTACGCCAATTTATGGATCAATTATATGAAGAGTACGTTGGGATTCACCTAAAATCAAAGAAATTT
ATTGATTCCCTAGCAGACTGGGGACAATTACTAAAAGAGGAAAAGAAATGA

Domains

Predicted by InterProScan.

• Recombination protein O C terminal (RecO_C) (84-238)

• Recombination protein O N terminal (RecO_N) (4-72)

3D structure

• AlphaFold DB: Q97TA7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recO	Streptococcus pneumoniae R6	99.219	100	0.992