Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilO   Type   Machinery gene
Locus tag   ABHL50_RS17865 Genome accession   NZ_CP156933
Coordinates   3697790..3698530 (-) Length   246 a.a.
NCBI ID   WP_000076101.1    Uniprot ID   N9LH62
Organism   Acinetobacter baumannii strain 2024CK-00546     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3692790..3703530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABHL50_RS17845 (ABHL50_17845) aroB 3693332..3694414 (-) 1083 WP_001194249.1 3-dehydroquinate synthase -
  ABHL50_RS17850 (ABHL50_17850) aroK 3694443..3695012 (-) 570 WP_000643712.1 shikimate kinase AroK -
  ABHL50_RS17855 (ABHL50_17855) pilQ 3695024..3697189 (-) 2166 WP_001017033.1 type IV pilus secretin PilQ family protein Machinery gene
  ABHL50_RS17860 (ABHL50_17860) pilP 3697252..3697779 (-) 528 WP_000695069.1 pilus assembly protein PilP Machinery gene
  ABHL50_RS17865 (ABHL50_17865) pilO 3697790..3698530 (-) 741 WP_000076101.1 type 4a pilus biogenesis protein PilO Machinery gene
  ABHL50_RS17870 (ABHL50_17870) pilN 3698527..3699168 (-) 642 WP_000201225.1 PilN domain-containing protein Machinery gene
  ABHL50_RS17875 (ABHL50_17875) pilM 3699168..3700226 (-) 1059 WP_031950501.1 pilus assembly protein PilM Machinery gene
  ABHL50_RS17880 (ABHL50_17880) ponA 3700388..3702943 (+) 2556 WP_000736677.1 penicillin-binding protein PBP1a -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27819.59 Da        Isoelectric Point: 4.8357

>NTDB_id=1003364 ABHL50_RS17865 WP_000076101.1 3697790..3698530(-) (pilO) [Acinetobacter baumannii strain 2024CK-00546]
MSQDELQELSLEQLSAKKKKFNLDKFLQQFNTLDMNNYGSWPISVKITCWIFIFFAVLALGYFIVIQPKLQAIDNAQAQE
SNLLNEFREKDSKLRNLQQYQVQLQEMQANFNQQLEQLPKETEIPSLVEDINLTGVNSGLKFKNIRLEDEVKQEIFIEQP
IAIEATGDYHAFGAFVSSIAALPRIVTMHDFTVDVSPAKDNKSDIPVLNYSIKAKTYRYVGATDTSEQTGKAPAASASTN
TTVQPK

Nucleotide


Download         Length: 741 bp        

>NTDB_id=1003364 ABHL50_RS17865 WP_000076101.1 3697790..3698530(-) (pilO) [Acinetobacter baumannii strain 2024CK-00546]
ATGAGTCAAGACGAACTTCAAGAATTGTCATTAGAACAATTATCTGCAAAGAAAAAGAAATTTAATCTCGATAAATTCCT
TCAGCAATTTAATACGCTGGATATGAACAACTATGGTAGTTGGCCAATATCTGTAAAAATTACGTGTTGGATTTTTATTT
TCTTTGCTGTGTTAGCTTTGGGGTATTTCATTGTTATTCAACCGAAATTACAAGCTATTGATAATGCTCAAGCTCAGGAA
AGCAATTTATTAAACGAATTTCGTGAAAAAGACTCGAAATTACGTAACCTGCAACAGTATCAGGTACAGCTTCAAGAGAT
GCAGGCAAATTTCAACCAGCAACTAGAGCAGTTGCCAAAAGAAACTGAGATTCCGAGTTTAGTTGAAGATATCAACTTAA
CAGGAGTGAACTCTGGATTGAAATTTAAAAATATTCGCTTAGAAGATGAAGTAAAGCAGGAAATTTTTATTGAGCAACCA
ATTGCCATAGAAGCGACCGGGGACTATCACGCATTTGGAGCTTTTGTAAGTAGTATCGCTGCTTTGCCTCGTATTGTAAC
CATGCACGATTTTACTGTTGATGTATCGCCAGCTAAAGATAACAAGTCTGATATTCCTGTGCTGAACTATTCCATTAAAG
CAAAAACATACCGATACGTAGGGGCAACAGATACATCGGAGCAAACAGGCAAAGCTCCAGCAGCATCTGCTTCAACGAAC
ACTACTGTTCAGCCGAAATAG

Domains

Predicted by InterproScan.

Pilus assembly protein, PilO (PilO)

(73-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9LH62

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilO Acinetobacter baumannii D1279779

100

100

1
  comO Acinetobacter baylyi ADP1

69.421

98.374

0.683

Multiple sequence alignment