Detailed information NTG1003252

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: EL256_RS04710
• Genome accession: NZ_LR134517
• Coordinates: 997803..999323 (-)
• Length: 506 a.a.
• NCBI ID: WP_126442903.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain NCTC13345
• Function: interact with DprA (predicted from homology) Homologous recombination

Genomic Context

Location: 992803..1004323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL256_RS04690 (NCTC13345_00927)	-	993487..994662 (-)	1176	WP_126442305.1	restriction endonuclease subunit S	-
EL256_RS04695 (NCTC13345_00929)	-	994650..995421 (-)	772	Protein_888	CAAX protease	-
EL256_RS04700 (NCTC13345_00930)	-	995508..995705 (-)	198	Protein_889	restriction endonuclease subunit M	-
EL256_RS04705 (NCTC13345_00931)	-	995718..997778 (-)	2061	WP_126442901.1	heavy metal translocating P-type ATPase	-
EL256_RS04710 (NCTC13345_00932)	comM	997803..999323 (-)	1521	WP_126442903.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
EL256_RS04715 (NCTC13345_00933)	def	999329..999853 (-)	525	WP_126442905.1	peptide deformylase	-
EL256_RS04720 (NCTC13345_00934)	clpP	999858..1000445 (-)	588	WP_000540573.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
EL256_RS04725 (NCTC13345_00935)	tig	1000466..1001821 (-)	1356	WP_126442907.1	trigger factor	-
EL256_RS04730 (NCTC13345_00936)	-	1001934..1002770 (-)	837	WP_126442909.1	outer membrane protein	-
EL256_RS04735 (NCTC13345_00937)	hpaA	1002800..1003582 (-)	783	WP_126442911.1	flagellar sheath lipoprotein HpaA	-
EL256_RS04740 (NCTC13345_00938)	moaC	1003701..1004177 (-)	477	WP_001131545.1	cyclic pyranopterin monophosphate synthase MoaC	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 57120.09 Da
• Isoelectric Point: 8.2333

>NTDB_id=1003252 EL256_RS04710 WP_126442903.1 997803..999323(-) (comM) [Helicobacter pylori strain NCTC13345]
MINTIFCATMQRGVAEIVAVEATFTRALPAFVISGLANSSIQEAKQRVQSALQNNDFTFPPLKITINLSPSDLPKSGSHF
DLPIALLIALQKQELAFKEWFAFGELGLDGKIKPNSNIFPMLLDIAIKHPHAKVIVPKANEELFSLIPNLQCFFVDHFKE
ALEILQNPEIKADTHTKKLPFKTIELNDKEYYFSDAYALDFKEVKGQAVAKEAALIASAGFHNLILEGSPGCGKSMIINR
MRYILPPLSLNEILEATKLRILSEQDGAYYPLRSFRNPHQSASKSSILGSSSLREPKPGEIALAHNGMLFFDELPHFKKD
ILEALREPLENNKLVISRVHSKIEYETSFLFVGAQNPCLCGNLLSATKACRCQDREIVQYKNRLSEPFLDRIDLFVQMEE
GNYKDTPSHSWTSKEMHELVLLAFKQQKLRKQSAFNGKLNEEQIERFCPLNTEAQKLLEQAVERFNLSMRSVNKVKKVAR
TIADLNACENIEKSHVLKALSFRKIS

Nucleotide

• Length: 1521 bp

>NTDB_id=1003252 EL256_RS04710 WP_126442903.1 997803..999323(-) (comM) [Helicobacter pylori strain NCTC13345]
ATGATCAACACGATATTTTGCGCAACCATGCAAAGGGGGGTGGCAGAAATCGTGGCTGTGGAGGCGACTTTCACAAGGGC
TTTACCGGCGTTTGTGATTTCAGGCTTGGCTAATAGCTCTATCCAAGAAGCCAAGCAACGGGTTCAATCGGCTTTACAAA
ATAACGATTTCACTTTCCCGCCTCTAAAAATCACCATCAACCTTTCCCCCTCAGATTTGCCTAAATCCGGGAGCCATTTT
GATTTGCCTATCGCTCTTTTAATCGCTTTGCAAAAACAAGAATTGGCTTTTAAAGAGTGGTTTGCTTTTGGGGAGTTGGG
GCTTGATGGCAAGATCAAACCCAATTCTAACATTTTCCCCATGCTCTTAGACATTGCCATTAAGCACCCCCATGCTAAAG
TCATTGTGCCTAAGGCGAATGAGGAGCTTTTTTCGCTCATCCCTAATTTGCAATGCTTTTTTGTGGATCATTTTAAAGAA
GCGTTAGAAATCTTGCAAAACCCTGAAATCAAAGCAGACACCCACACGAAAAAACTACCTTTTAAAACGATAGAATTGAA
CGATAAAGAGTATTATTTTTCAGACGCCTATGCCTTAGATTTTAAAGAAGTTAAGGGGCAAGCTGTCGCTAAAGAAGCCG
CTTTGATCGCTAGCGCCGGGTTTCATAACTTGATTTTAGAGGGAAGTCCAGGGTGTGGGAAAAGCATGATCATTAATCGC
ATGCGTTATATCTTACCTCCCTTAAGCCTGAATGAAATCCTAGAAGCGACAAAATTACGCATTTTAAGCGAGCAAGACGG
CGCCTATTACCCCTTAAGGAGCTTTAGAAACCCTCACCAGAGCGCTTCAAAATCCAGCATTTTAGGCTCAAGCTCTTTAA
GAGAGCCAAAACCCGGCGAAATCGCACTAGCGCATAACGGCATGCTTTTTTTTGATGAATTGCCCCATTTTAAAAAGGAT
ATTTTGGAAGCCTTGAGAGAGCCTTTAGAAAACAATAAATTAGTGATCTCACGAGTGCATAGCAAGATTGAATACGAAAC
CTCTTTTTTGTTTGTGGGGGCTCAAAACCCTTGCTTGTGCGGGAATTTACTCAGCGCCACCAAAGCATGCCGTTGCCAAG
ATAGGGAAATTGTGCAGTATAAAAACCGCTTGAGCGAGCCTTTTTTGGACAGGATTGATTTGTTCGTGCAAATGGAAGAG
GGGAATTATAAAGACACGCCGTCGCATTCTTGGACTTCAAAAGAGATGCATGAATTAGTATTGTTAGCTTTCAAACAGCA
AAAGTTAAGGAAACAGAGCGCTTTTAATGGTAAGCTTAATGAAGAGCAGATTGAACGATTTTGCCCTTTAAATACTGAAG
CGCAAAAGTTGTTAGAGCAGGCGGTTGAAAGGTTTAATCTGTCCATGCGCTCTGTCAATAAGGTCAAAAAAGTCGCTAGG
ACGATTGCGGATTTAAACGCTTGCGAGAATATAGAAAAATCTCATGTGCTTAAAGCGCTGAGTTTTAGAAAGATTTCTTA
A

Domains

Predicted by InterProScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (412-503)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (200-403)

• Subunit ChlI of Mg-chelatase (ChlI) (20-140)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Helicobacter pylori 26695	97.036	100	0.97
comM	Legionella pneumophila str. Paris	36.581	99.407	0.364
comM	Legionella pneumophila strain ERS1305867	36.581	99.407	0.364
comM	Acinetobacter baylyi ADP1	36.008	100	0.364