Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | AACH30_RS02300 | Genome accession | NZ_AP027243 |
| Coordinates | 471968..473773 (+) | Length | 601 a.a. |
| NCBI ID | WP_265150334.1 | Uniprot ID | A0AA43PEJ2 |
| Organism | Lactococcus garvieae strain L21-68 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 466968..478773
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AACH30_RS02280 (LG21E68_04420) | - | 467126..467950 (-) | 825 | WP_014024379.1 | Cof-type HAD-IIB family hydrolase | - |
| AACH30_RS02285 (LG21E68_04430) | - | 468307..469728 (+) | 1422 | WP_014024380.1 | NCS2 family permease | - |
| AACH30_RS02290 (LG21E68_04440) | - | 469805..470905 (+) | 1101 | WP_281162249.1 | YdcF family protein | - |
| AACH30_RS02295 (LG21E68_04450) | coiA | 470980..471984 (+) | 1005 | WP_265150332.1 | competence protein CoiA family protein | Machinery gene |
| AACH30_RS02300 (LG21E68_04460) | pepF | 471968..473773 (+) | 1806 | WP_265150334.1 | oligoendopeptidase F | Regulator |
| AACH30_RS02305 (LG21E68_04470) | - | 473773..474456 (+) | 684 | WP_004258974.1 | O-methyltransferase | - |
| AACH30_RS02310 (LG21E68_04480) | - | 474554..475462 (+) | 909 | WP_265150336.1 | peptidyl-prolyl cis-trans isomerase | - |
| AACH30_RS02315 (LG21E68_04490) | alaS | 475713..478331 (+) | 2619 | WP_265150338.1 | alanine--tRNA ligase | - |
| AACH30_RS02320 (LG21E68_04500) | - | 478473..478670 (-) | 198 | WP_016170988.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 69778.40 Da Isoelectric Point: 4.7631
>NTDB_id=100310 AACH30_RS02300 WP_265150334.1 471968..473773(+) (pepF) [Lactococcus garvieae strain L21-68]
MAKKRDEIAENLTWDLSTVFENDAAWELELKRVSEKLETVNAYEGHLLDSAQSLLEITEIELEISRAVEKVYVYASMKHD
QDTQVSLYQEYEAKATNLYAKFGESFAFYEPEFLALTPERYESFRREEPKLERYSHMFERLFAKKEHILSPKEEKLLASA
SEIFGAAAETFEIFDNADIELPMIKDEKGQEVQLTHGNYISLMESKERKVRKAAYQALYSNYEQYQHTYAKTLQTNVKVH
NFKAKMRGYHSARQAALSSNFIPEEVYDKLLESVNKYLPLLHRYIKLREQILGLEDDLKMYDVYTPLSDLDYKFNYPEAV
EKAQEVLQILGPEYAHHVKKAFEERWIDVAENSGKRSGAYSGGCYDTNAFMLLNWQETLDDLFTLVHEMGHSMHSTFTRE
NQPYVYGDYPIFLAEIASTTNENILTESLLAASTDEKVRFAILNHWLDGFRGTVFRQSQFAEFEHEIHKADQEGKVLTSE
FMNQLYADLNEKYYGLPARENSEIQYEWARIPHFYYNYYVFQYATGFAAATYLAEAIVKGGTDAREKYLTYLKAGSSDYP
LAVIAQAGVDMEETTYLESAFAVFEKRLIELEKLVEKGAHL
MAKKRDEIAENLTWDLSTVFENDAAWELELKRVSEKLETVNAYEGHLLDSAQSLLEITEIELEISRAVEKVYVYASMKHD
QDTQVSLYQEYEAKATNLYAKFGESFAFYEPEFLALTPERYESFRREEPKLERYSHMFERLFAKKEHILSPKEEKLLASA
SEIFGAAAETFEIFDNADIELPMIKDEKGQEVQLTHGNYISLMESKERKVRKAAYQALYSNYEQYQHTYAKTLQTNVKVH
NFKAKMRGYHSARQAALSSNFIPEEVYDKLLESVNKYLPLLHRYIKLREQILGLEDDLKMYDVYTPLSDLDYKFNYPEAV
EKAQEVLQILGPEYAHHVKKAFEERWIDVAENSGKRSGAYSGGCYDTNAFMLLNWQETLDDLFTLVHEMGHSMHSTFTRE
NQPYVYGDYPIFLAEIASTTNENILTESLLAASTDEKVRFAILNHWLDGFRGTVFRQSQFAEFEHEIHKADQEGKVLTSE
FMNQLYADLNEKYYGLPARENSEIQYEWARIPHFYYNYYVFQYATGFAAATYLAEAIVKGGTDAREKYLTYLKAGSSDYP
LAVIAQAGVDMEETTYLESAFAVFEKRLIELEKLVEKGAHL
Nucleotide
Download Length: 1806 bp
>NTDB_id=100310 AACH30_RS02300 WP_265150334.1 471968..473773(+) (pepF) [Lactococcus garvieae strain L21-68]
ATGGCAAAAAAACGTGATGAAATAGCTGAAAACTTAACTTGGGATTTGTCAACTGTATTTGAAAATGATGCCGCCTGGGA
ACTTGAACTTAAAAGAGTTTCAGAAAAATTAGAGACGGTAAACGCTTATGAAGGACATCTTCTAGATAGCGCTCAAAGCT
TATTAGAAATCACGGAAATTGAGCTAGAAATCTCGCGTGCTGTGGAAAAGGTTTATGTCTATGCCTCAATGAAGCATGAC
CAAGATACGCAAGTGAGCCTTTACCAAGAATACGAAGCCAAAGCCACAAATTTATATGCCAAGTTTGGTGAAAGCTTTGC
TTTTTATGAGCCGGAATTTTTAGCTTTAACGCCAGAACGTTATGAAAGTTTTAGAAGAGAAGAACCTAAACTGGAACGCT
ATTCCCATATGTTTGAACGCCTTTTTGCTAAAAAGGAGCATATTTTAAGTCCAAAAGAGGAAAAACTTTTAGCCAGTGCG
AGTGAGATTTTTGGTGCTGCGGCCGAAACCTTTGAAATTTTTGACAATGCTGATATTGAACTTCCGATGATAAAAGATGA
AAAAGGACAGGAAGTACAGCTGACACATGGCAATTATATCTCGCTCATGGAAAGTAAGGAGCGTAAGGTACGAAAGGCAG
CTTATCAAGCCCTTTATAGCAACTATGAACAGTATCAACACACTTATGCTAAAACGCTACAAACAAATGTAAAAGTCCAT
AATTTTAAGGCAAAGATGCGGGGCTACCATTCAGCTCGTCAGGCAGCTTTATCAAGTAATTTTATTCCGGAAGAAGTCTA
CGATAAGCTCCTAGAGTCTGTCAATAAATATTTGCCTCTTTTACATCGCTATATTAAATTGCGTGAACAGATTTTAGGTT
TAGAGGACGATTTAAAGATGTATGATGTTTATACACCCTTATCGGACTTGGATTATAAGTTTAACTACCCCGAGGCAGTA
GAGAAAGCCCAAGAAGTTCTTCAAATTTTGGGGCCTGAATACGCGCACCATGTAAAAAAAGCTTTTGAGGAGCGTTGGAT
TGATGTGGCTGAAAATAGCGGTAAACGTTCGGGTGCTTACTCAGGTGGATGCTATGATACAAATGCTTTTATGCTGTTAA
ACTGGCAAGAAACTTTGGATGATTTGTTCACCTTAGTACATGAAATGGGTCACAGTATGCATTCCACATTTACACGGGAA
AATCAACCTTATGTTTATGGGGACTATCCAATCTTTCTTGCAGAAATTGCTTCAACAACCAATGAGAATATCTTGACTGA
AAGTTTACTTGCGGCGTCGACAGATGAAAAAGTGCGTTTTGCTATTTTAAACCACTGGCTTGATGGTTTCCGTGGCACTG
TTTTTCGTCAAAGTCAATTTGCTGAATTTGAACATGAAATACATAAAGCTGATCAAGAAGGAAAAGTTTTGACCAGTGAA
TTCATGAACCAACTTTATGCAGATCTTAATGAAAAATACTACGGTTTACCCGCCCGGGAAAATTCTGAAATTCAGTATGA
GTGGGCCCGCATTCCGCACTTCTATTACAACTATTATGTCTTCCAATATGCTACTGGCTTTGCCGCAGCAACTTATCTTG
CTGAGGCTATCGTCAAGGGTGGGACAGATGCGCGTGAAAAATACCTCACTTATCTCAAAGCCGGATCAAGTGATTATCCC
CTGGCTGTGATTGCTCAAGCAGGTGTGGATATGGAAGAAACAACATATTTAGAATCAGCTTTTGCTGTTTTTGAAAAACG
TTTAATTGAGCTAGAAAAATTAGTCGAAAAAGGAGCCCATTTATAA
ATGGCAAAAAAACGTGATGAAATAGCTGAAAACTTAACTTGGGATTTGTCAACTGTATTTGAAAATGATGCCGCCTGGGA
ACTTGAACTTAAAAGAGTTTCAGAAAAATTAGAGACGGTAAACGCTTATGAAGGACATCTTCTAGATAGCGCTCAAAGCT
TATTAGAAATCACGGAAATTGAGCTAGAAATCTCGCGTGCTGTGGAAAAGGTTTATGTCTATGCCTCAATGAAGCATGAC
CAAGATACGCAAGTGAGCCTTTACCAAGAATACGAAGCCAAAGCCACAAATTTATATGCCAAGTTTGGTGAAAGCTTTGC
TTTTTATGAGCCGGAATTTTTAGCTTTAACGCCAGAACGTTATGAAAGTTTTAGAAGAGAAGAACCTAAACTGGAACGCT
ATTCCCATATGTTTGAACGCCTTTTTGCTAAAAAGGAGCATATTTTAAGTCCAAAAGAGGAAAAACTTTTAGCCAGTGCG
AGTGAGATTTTTGGTGCTGCGGCCGAAACCTTTGAAATTTTTGACAATGCTGATATTGAACTTCCGATGATAAAAGATGA
AAAAGGACAGGAAGTACAGCTGACACATGGCAATTATATCTCGCTCATGGAAAGTAAGGAGCGTAAGGTACGAAAGGCAG
CTTATCAAGCCCTTTATAGCAACTATGAACAGTATCAACACACTTATGCTAAAACGCTACAAACAAATGTAAAAGTCCAT
AATTTTAAGGCAAAGATGCGGGGCTACCATTCAGCTCGTCAGGCAGCTTTATCAAGTAATTTTATTCCGGAAGAAGTCTA
CGATAAGCTCCTAGAGTCTGTCAATAAATATTTGCCTCTTTTACATCGCTATATTAAATTGCGTGAACAGATTTTAGGTT
TAGAGGACGATTTAAAGATGTATGATGTTTATACACCCTTATCGGACTTGGATTATAAGTTTAACTACCCCGAGGCAGTA
GAGAAAGCCCAAGAAGTTCTTCAAATTTTGGGGCCTGAATACGCGCACCATGTAAAAAAAGCTTTTGAGGAGCGTTGGAT
TGATGTGGCTGAAAATAGCGGTAAACGTTCGGGTGCTTACTCAGGTGGATGCTATGATACAAATGCTTTTATGCTGTTAA
ACTGGCAAGAAACTTTGGATGATTTGTTCACCTTAGTACATGAAATGGGTCACAGTATGCATTCCACATTTACACGGGAA
AATCAACCTTATGTTTATGGGGACTATCCAATCTTTCTTGCAGAAATTGCTTCAACAACCAATGAGAATATCTTGACTGA
AAGTTTACTTGCGGCGTCGACAGATGAAAAAGTGCGTTTTGCTATTTTAAACCACTGGCTTGATGGTTTCCGTGGCACTG
TTTTTCGTCAAAGTCAATTTGCTGAATTTGAACATGAAATACATAAAGCTGATCAAGAAGGAAAAGTTTTGACCAGTGAA
TTCATGAACCAACTTTATGCAGATCTTAATGAAAAATACTACGGTTTACCCGCCCGGGAAAATTCTGAAATTCAGTATGA
GTGGGCCCGCATTCCGCACTTCTATTACAACTATTATGTCTTCCAATATGCTACTGGCTTTGCCGCAGCAACTTATCTTG
CTGAGGCTATCGTCAAGGGTGGGACAGATGCGCGTGAAAAATACCTCACTTATCTCAAAGCCGGATCAAGTGATTATCCC
CTGGCTGTGATTGCTCAAGCAGGTGTGGATATGGAAGAAACAACATATTTAGAATCAGCTTTTGCTGTTTTTGAAAAACG
TTTAATTGAGCTAGAAAAATTAGTCGAAAAAGGAGCCCATTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
65.058 |
100 |
0.651 |