Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | ABEF89_RS01720 | Genome accession | NZ_CP156801 |
| Coordinates | 362978..363622 (+) | Length | 214 a.a. |
| NCBI ID | WP_034585540.1 | Uniprot ID | A0A0A3W2G3 |
| Organism | Acinetobacter thermotolerans strain ANC 7892 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 357978..368622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABEF89_RS01705 (ABEF89_01705) | - | 358357..359160 (+) | 804 | WP_347456161.1 | putative RNA methyltransferase | - |
| ABEF89_RS01710 (ABEF89_01710) | ponA | 359222..361753 (-) | 2532 | WP_347456162.1 | penicillin-binding protein PBP1a | - |
| ABEF89_RS01715 (ABEF89_01715) | pilM | 361920..362978 (+) | 1059 | WP_034585542.1 | pilus assembly protein PilM | Machinery gene |
| ABEF89_RS01720 (ABEF89_01720) | comN | 362978..363622 (+) | 645 | WP_034585540.1 | PilN domain-containing protein | Machinery gene |
| ABEF89_RS01725 (ABEF89_01725) | comO | 363619..364338 (+) | 720 | WP_034585538.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ABEF89_RS01730 (ABEF89_01730) | pilP | 364338..364865 (+) | 528 | WP_034585535.1 | pilus assembly protein PilP | Machinery gene |
| ABEF89_RS01735 (ABEF89_01735) | pilQ | 364882..367053 (+) | 2172 | WP_347456163.1 | type IV pilus secretin PilQ | Machinery gene |
| ABEF89_RS01740 (ABEF89_01740) | aroK | 367090..367626 (+) | 537 | WP_034585528.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23972.26 Da Isoelectric Point: 4.7839
>NTDB_id=1002919 ABEF89_RS01720 WP_034585540.1 362978..363622(+) (comN) [Acinetobacter thermotolerans strain ANC 7892]
MAKINLLPWRDELRVKRNNEFIAYCVGALLLGVAAAGGGWFYYDQKLQDQEQANQLIISTNQNLDVQLKSLDGLQEQRDA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSDMYITKFVRAGDKFTIEGKAASPNTVAELLRNLEASPWYRNAFMNSFLA
AEEKKDKAPSSLIPRIEESYGTFTVTVDLDQIAQPVLSEQQPQVAETTTQGATS
MAKINLLPWRDELRVKRNNEFIAYCVGALLLGVAAAGGGWFYYDQKLQDQEQANQLIISTNQNLDVQLKSLDGLQEQRDA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSDMYITKFVRAGDKFTIEGKAASPNTVAELLRNLEASPWYRNAFMNSFLA
AEEKKDKAPSSLIPRIEESYGTFTVTVDLDQIAQPVLSEQQPQVAETTTQGATS
Nucleotide
Download Length: 645 bp
>NTDB_id=1002919 ABEF89_RS01720 WP_034585540.1 362978..363622(+) (comN) [Acinetobacter thermotolerans strain ANC 7892]
ATGGCAAAAATTAATCTATTGCCTTGGCGTGATGAGCTAAGAGTCAAAAGAAATAACGAATTTATCGCATATTGCGTTGG
GGCCTTGTTGCTCGGTGTAGCAGCAGCTGGAGGTGGCTGGTTCTATTACGATCAAAAATTACAGGATCAGGAACAGGCGA
ACCAGTTAATTATCAGCACTAACCAGAATCTGGATGTGCAGCTGAAATCATTAGATGGTTTGCAAGAGCAGCGTGATGCA
ATTGTAGAACGCATGAAGTTGATTCAAGGCTTACAAACCCAGCGTCCGATTGCGGTGCATCTGATTGATGAAATTGTACG
GGTAACGCCAAGTGATATGTATATCACCAAGTTTGTACGTGCCGGTGACAAGTTCACGATTGAAGGCAAGGCTGCAAGTC
CAAATACCGTGGCAGAGCTGCTCCGTAATCTGGAAGCATCTCCTTGGTATCGCAATGCATTTATGAATTCGTTCCTGGCA
GCGGAAGAGAAGAAGGACAAAGCACCAAGCTCTCTGATTCCGCGTATTGAAGAGTCTTATGGAACGTTCACAGTAACTGT
TGATCTTGACCAGATTGCTCAGCCCGTGCTTTCCGAGCAGCAACCACAGGTAGCTGAGACAACAACACAGGGGGCGACAT
CATGA
ATGGCAAAAATTAATCTATTGCCTTGGCGTGATGAGCTAAGAGTCAAAAGAAATAACGAATTTATCGCATATTGCGTTGG
GGCCTTGTTGCTCGGTGTAGCAGCAGCTGGAGGTGGCTGGTTCTATTACGATCAAAAATTACAGGATCAGGAACAGGCGA
ACCAGTTAATTATCAGCACTAACCAGAATCTGGATGTGCAGCTGAAATCATTAGATGGTTTGCAAGAGCAGCGTGATGCA
ATTGTAGAACGCATGAAGTTGATTCAAGGCTTACAAACCCAGCGTCCGATTGCGGTGCATCTGATTGATGAAATTGTACG
GGTAACGCCAAGTGATATGTATATCACCAAGTTTGTACGTGCCGGTGACAAGTTCACGATTGAAGGCAAGGCTGCAAGTC
CAAATACCGTGGCAGAGCTGCTCCGTAATCTGGAAGCATCTCCTTGGTATCGCAATGCATTTATGAATTCGTTCCTGGCA
GCGGAAGAGAAGAAGGACAAAGCACCAAGCTCTCTGATTCCGCGTATTGAAGAGTCTTATGGAACGTTCACAGTAACTGT
TGATCTTGACCAGATTGCTCAGCCCGTGCTTTCCGAGCAGCAACCACAGGTAGCTGAGACAACAACACAGGGGGCGACAT
CATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
69.565 |
96.729 |
0.673 |
| pilN | Acinetobacter baumannii D1279779 |
74.611 |
90.187 |
0.673 |