Detailed information NTG1002791

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ABEF87_RS01505
• Genome accession: NZ_CP156789
• Coordinates: 306449..307309 (-)
• Length: 286 a.a.
• NCBI ID: WP_347455460.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7919
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 301449..312309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF87_RS01480 (ABEF87_01480)	recN	301566..303227 (-)	1662	WP_347453466.1	DNA repair protein RecN	-
ABEF87_RS01485 (ABEF87_01485)	-	303641..303964 (+)	324	WP_034587531.1	pyrimidine/purine nucleoside phosphorylase	-
ABEF87_RS01490 (ABEF87_01490)	rlmB	304117..304866 (+)	750	WP_347453467.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
ABEF87_RS01495 (ABEF87_01495)	-	304903..305823 (+)	921	WP_347453468.1	DMT family transporter	-
ABEF87_RS01500 (ABEF87_01500)	coaE	305848..306447 (-)	600	WP_347455459.1	dephospho-CoA kinase	-
ABEF87_RS01505 (ABEF87_01505)	pilD	306449..307309 (-)	861	WP_347455460.1	A24 family peptidase	Machinery gene
ABEF87_RS01510 (ABEF87_01510)	pilC	307309..308538 (-)	1230	WP_347453471.1	type II secretion system F family protein	Machinery gene
ABEF87_RS01515 (ABEF87_01515)	pilB	308570..310279 (-)	1710	WP_347453472.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ABEF87_RS01520 (ABEF87_01520)	tpiA	310563..311354 (+)	792	WP_347453473.1	triose-phosphate isomerase	-
ABEF87_RS01525 (ABEF87_01525)	secG	311368..311697 (+)	330	WP_347453474.1	preprotein translocase subunit SecG	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 31945.24 Da
• Isoelectric Point: 8.0584

>NTDB_id=1002791 ABEF87_RS01505 WP_347455460.1 306449..307309(-) (pilD) [Acinetobacter thermotolerans strain ANC 7919]
MQDLILYFTQNPTALYIAVGLFSLCIGSFLNVVIYRTPKMMEQEWRTDCQLFLHPDQPIIEESKITLSKPASTCPKCQTP
IRWYQNIPVISWLALRGKCGSCTHPISARYPFIEILTAVCALIVVAVFGPTVQMLFGLVLTYMLIALTFIDFDTQLLPDR
FTLPLAALGLGINSYSIYTSPSSAIWGYIIGFLCLWLVYYLFKIITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
VGAIIGIILLKVRKENQPFAFGPYIAIAGWIAFLWGEQIMKAYLGQ

Nucleotide

• Length: 861 bp

>NTDB_id=1002791 ABEF87_RS01505 WP_347455460.1 306449..307309(-) (pilD) [Acinetobacter thermotolerans strain ANC 7919]
ATGCAAGATCTTATTTTATATTTCACACAAAACCCGACGGCGCTCTATATCGCAGTTGGGCTTTTTAGCCTCTGTATCGG
CAGTTTTCTGAATGTAGTGATTTACCGCACACCGAAAATGATGGAACAGGAATGGCGAACCGATTGCCAGCTGTTTTTAC
ATCCAGATCAGCCGATCATTGAGGAAAGCAAAATCACTTTAAGCAAACCAGCATCCACTTGTCCGAAATGCCAGACACCT
ATCCGCTGGTACCAGAATATTCCTGTGATCAGCTGGTTAGCGTTACGTGGTAAATGTGGTTCCTGCACTCATCCAATCAG
TGCCCGATATCCATTTATTGAGATTCTGACTGCAGTCTGTGCACTCATTGTTGTGGCAGTCTTTGGTCCAACAGTGCAGA
TGCTATTTGGACTAGTGCTGACCTATATGCTGATTGCCCTGACTTTTATCGACTTTGATACCCAGCTACTGCCGGATCGC
TTTACCCTGCCACTCGCTGCACTGGGTCTAGGAATTAATAGCTACAGTATTTATACCTCACCCTCTTCAGCGATCTGGGG
GTATATTATTGGTTTTCTGTGCCTTTGGCTCGTGTATTACCTGTTCAAGATCATTACAGGGAAAGAAGGTATGGGCTATG
GTGACTTTAAGCTATTGGCTGCGCTAGGTGCTTGGATGGGTCCACTGATGCTGCCGCTGATCGTATTGCTATCCTCACTG
GTCGGTGCCATTATCGGTATCATCCTGTTAAAAGTCCGCAAGGAAAATCAGCCCTTCGCTTTTGGCCCTTATATTGCCAT
TGCTGGCTGGATTGCCTTCCTCTGGGGTGAACAGATCATGAAAGCATATTTAGGTCAATAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	82.105	99.65	0.818
pilD	Acinetobacter nosocomialis M2	81.754	99.65	0.815
pilD	Vibrio cholerae strain A1552	55.805	93.357	0.521
pilD	Vibrio campbellii strain DS40M4	51.071	97.902	0.5
pilD	Neisseria gonorrhoeae MS11	47.059	95.105	0.448