Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   ABEF85_RS03630 Genome accession   NZ_CP156776
Coordinates   783687..788183 (+) Length   1498 a.a.
NCBI ID   WP_347464154.1    Uniprot ID   -
Organism   Acinetobacter thermotolerans strain ANC 7955     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 778687..793183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEF85_RS03605 (ABEF85_03605) - 779102..779758 (-) 657 WP_034583329.1 hypothetical protein -
  ABEF85_RS03610 (ABEF85_03610) pilG 780078..780461 (+) 384 WP_034583327.1 twitching motility response regulator PilG Regulator
  ABEF85_RS03615 (ABEF85_03615) - 780492..780860 (+) 369 WP_034583325.1 response regulator -
  ABEF85_RS03620 (ABEF85_03620) - 780867..781403 (+) 537 WP_034583323.1 chemotaxis protein CheW -
  ABEF85_RS03625 (ABEF85_03625) - 781449..783521 (+) 2073 WP_347453015.1 methyl-accepting chemotaxis protein -
  ABEF85_RS03630 (ABEF85_03630) chpA 783687..788183 (+) 4497 WP_347464154.1 Hpt domain-containing protein Regulator
  ABEF85_RS03635 (ABEF85_03635) - 788187..788645 (+) 459 WP_347453013.1 hypothetical protein -
  ABEF85_RS03640 (ABEF85_03640) dapE 788714..789850 (-) 1137 WP_034583312.1 succinyl-diaminopimelate desuccinylase -
  ABEF85_RS03645 (ABEF85_03645) - 789974..790123 (-) 150 WP_034583309.1 entericidin A/B family lipoprotein -
  ABEF85_RS03650 (ABEF85_03650) - 790260..791108 (-) 849 WP_347453012.1 DUF1853 family protein -
  ABEF85_RS03655 (ABEF85_03655) - 791197..791595 (+) 399 WP_034583304.1 YbaN family protein -
  ABEF85_RS03660 (ABEF85_03660) elsL 791599..792105 (+) 507 WP_034583302.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1498 a.a.        Molecular weight: 166919.47 Da        Isoelectric Point: 4.1987

>NTDB_id=1002628 ABEF85_RS03630 WP_347464154.1 783687..788183(+) (chpA) [Acinetobacter thermotolerans strain ANC 7955]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNALFPQWLATPDHKETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWTVEDTLNRVLSGTLELTPTIQKFAQATLNVYQYLLYPCFKQTQPLTVDLRPIVLLGQQLQQQQTPEPELEELLQL
ADTLTAEGQYSGLELADTTEETPNVETPVNEVTAEEAIETVETVAEERSDLEETVAIFIEEAEEHLATIYDFLKHENIAK
QDYNSLIRALHTLRGSSSMAQIDQIFDASSKVENLFKTLVQDEIASTSKEIALLQQYSEFVGDYLHLLRQGKTEQLDAIS
ATFDAAWNDYGFITTEDHDAVQSQGLVSRLVELNIDQLLDAEFEFDRRAVEEYPAYIEALSQQAAELVAHTDNRAAVGIH
EFASQLKAAYDALIHRPVLLQSDYAFELFAQAHQEFIHLFDTLAAGQRVILSTEVEKLLADLSAFVQQEIEEFEPEAAPE
TVVEAPEAAPVATGSVDFAAISQCMDLDRQQSEYDASNRDFDADLLDIFLEEADELLAGIDEDLNTWAREPENTESLNNL
MRYLHTLKGGANMIAATNIGSIAHELESIYERVIRQQIAVSPALIQIVRLVQDSVSDRIQTIRDELIDYPATETINILQN
IQALAAGTATATTAVDTAVVEPVVAVEAESEEDSEEIAVEAESTESVAEISEPEILLDPVEETVVEEVAAASVEPVSEED
ELKAIVAETFREESEEILGNAEKLLEQWFDQRSDRSLLLQLQRAAHSIKGGARMAGDETIATIAYGLETTFEQFAVHHFN
SNAYDSLLQQTWKWLAQAIFKHDYSGFEQIKTALDAIEFVDVTAQLPERLTKTESLDITTGFEFVQGDGTEPPNMMGEWA
ETAASDNSNEMIRISADLVEKMINLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELETQIIAKHGAEN
SRYTDFDPLEMDQYSSLNQLSKSLAESASDLIDFKSTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQR
IVRQTSTTLNRPAELIVQNTEGELDRNILERLVSPFEHMLRNAIDHGLEDTAERIALNKPEVGSIVLNISRQGTDVLISF
SDDGKGIDSEAIRAKAIAKGLLKEEQQVDQEELLQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVSVKSELGK
GTTFTIRVPTTVAVSDALMVKAGDQQYAISLAQIDRIVRIAPTTLETYFNSKDDYFKIDGVNYKLRYLSEFVANQPVPRL
NNIANSLPVLLIKGNNGQSIALLVDQLVGSRAQIVVKPIGQQFANIGVVAGATILGDGSVCLILDGQNVARQAQATQRIK
QVSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNL
VRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQELIAAQQG

Nucleotide


Download         Length: 4497 bp        

>NTDB_id=1002628 ABEF85_RS03630 WP_347464154.1 783687..788183(+) (chpA) [Acinetobacter thermotolerans strain ANC 7955]
ATGAAAGAAATATTAAAAGACTTAGTTGAAACGACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAAATTTTCGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAACGCTTTATTTCCACAGTGGCTTGCCACACCAGATC
ATAAAGAAACACTGACGACCATTCGCCGCCATTTCCATACCTTAAAAGGTTCAGGGCGTATGGTGGGGGCGAAACAGGCC
GGTGAAATTGCCTGGACAGTTGAAGATACCCTCAACCGGGTATTGTCAGGCACACTTGAACTGACACCAACTATTCAAAA
GTTTGCTCAGGCAACTTTGAATGTCTATCAATACCTGTTGTATCCATGCTTTAAACAGACACAACCATTAACCGTGGATC
TGCGCCCAATCGTATTGCTTGGGCAGCAACTGCAACAGCAGCAGACCCCAGAACCAGAATTAGAAGAATTATTACAGCTG
GCAGATACACTGACGGCTGAAGGCCAATACTCTGGTCTTGAACTTGCAGATACAACAGAAGAAACGCCTAACGTTGAAAC
TCCTGTAAATGAGGTTACGGCTGAAGAAGCAATAGAGACTGTTGAAACCGTTGCAGAGGAACGTAGCGATCTGGAAGAAA
CGGTTGCGATCTTTATTGAAGAAGCTGAAGAGCATCTGGCAACGATTTATGACTTCCTGAAGCATGAAAATATTGCCAAG
CAGGATTACAACAGTCTGATTCGTGCGCTGCATACCCTGCGTGGCAGTTCATCTATGGCGCAGATTGACCAGATTTTTGA
TGCCAGCTCTAAGGTTGAAAACCTGTTTAAAACACTGGTTCAAGACGAAATTGCATCGACTTCCAAAGAAATTGCCTTGT
TGCAGCAATATTCTGAATTTGTGGGTGATTATCTGCACCTGTTGCGTCAGGGCAAAACTGAACAACTGGATGCGATTTCT
GCAACTTTTGATGCAGCCTGGAATGACTACGGCTTTATCACTACCGAAGATCATGATGCGGTGCAGTCGCAAGGTTTGGT
ATCCCGTCTGGTTGAACTGAATATCGACCAGTTGCTGGATGCCGAGTTTGAATTTGACCGCCGTGCCGTTGAAGAATATC
CAGCTTATATTGAAGCCTTAAGCCAGCAGGCAGCTGAACTGGTGGCGCATACGGATAACCGTGCAGCTGTGGGTATTCAT
GAATTCGCCTCACAGTTAAAAGCGGCTTATGATGCACTGATTCATCGACCAGTGTTGCTGCAAAGCGATTATGCCTTTGA
GCTGTTCGCACAGGCGCATCAGGAATTTATCCACCTGTTCGATACCCTGGCTGCAGGTCAACGCGTGATTCTCAGCACAG
AAGTTGAAAAACTGTTGGCGGATCTGTCTGCCTTTGTACAGCAAGAGATTGAAGAATTCGAGCCAGAAGCAGCGCCTGAA
ACAGTGGTAGAAGCACCTGAGGCTGCTCCTGTAGCTACAGGTAGTGTTGACTTTGCTGCCATCAGTCAATGTATGGATCT
GGACCGTCAACAGAGCGAATATGATGCTTCCAATCGTGACTTCGATGCAGATCTGCTGGATATCTTCCTGGAAGAAGCCG
ATGAGCTGCTAGCAGGAATTGACGAAGACCTGAATACCTGGGCACGTGAACCAGAAAATACTGAATCACTCAATAACCTG
ATGCGTTATCTGCACACCCTCAAAGGTGGTGCAAACATGATTGCAGCAACCAATATCGGTTCGATTGCGCATGAACTGGA
AAGCATCTATGAACGCGTGATTCGTCAGCAGATTGCGGTATCACCAGCACTGATCCAGATTGTGCGACTGGTACAGGATA
GTGTTTCTGACCGTATCCAGACCATCCGTGATGAACTGATTGATTATCCAGCGACAGAAACCATTAATATCCTGCAAAAC
ATCCAGGCACTGGCTGCGGGTACAGCAACAGCGACTACAGCAGTCGATACTGCAGTGGTTGAACCTGTGGTTGCTGTGGA
AGCAGAATCGGAAGAAGATAGTGAAGAGATTGCTGTTGAAGCTGAAAGCACTGAGTCTGTAGCAGAAATTTCTGAACCGG
AAATTCTGTTAGATCCGGTTGAAGAAACAGTTGTTGAAGAAGTAGCTGCAGCATCAGTTGAACCTGTTTCAGAAGAAGAC
GAACTGAAAGCGATTGTTGCAGAGACGTTCCGCGAAGAATCTGAAGAGATTCTAGGAAATGCTGAGAAGCTGCTGGAACA
ATGGTTCGACCAGCGTAGTGACCGTAGCTTGCTGCTCCAATTACAACGTGCGGCCCACAGTATTAAAGGTGGGGCGCGTA
TGGCAGGCGACGAAACCATCGCAACTATTGCCTATGGTTTGGAAACCACTTTCGAACAGTTCGCGGTTCATCATTTCAAC
TCCAATGCCTACGACAGCCTGTTACAGCAGACCTGGAAATGGCTGGCTCAGGCAATCTTCAAGCATGATTACAGTGGTTT
TGAACAGATCAAGACTGCGTTAGATGCAATTGAGTTTGTCGATGTCACTGCACAGTTGCCGGAACGTCTGACCAAAACTG
AAAGTCTTGATATTACTACTGGCTTTGAATTTGTTCAGGGTGATGGTACTGAACCACCTAATATGATGGGTGAGTGGGCA
GAAACAGCGGCTTCTGACAACAGCAACGAAATGATCCGTATCTCGGCTGATCTGGTTGAGAAGATGATCAATCTGTCGGG
TGAGAATTCGATTAACCGTTCGCGTATCGAGATGGATCTGGGGCAGCTCGGCAATACCCTGAACGAGATGGAACTGGCGA
TCAAGCGTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAACCCAGATTATTGCCAAGCACGGTGCTGAAAAC
TCGCGCTATACCGACTTCGACCCATTGGAGATGGACCAGTATTCCTCTCTGAACCAGCTGTCGAAATCGCTGGCTGAATC
TGCATCGGATTTAATCGACTTCAAGTCAACGCTGGCGGAAAAAATCCGTGATACCGAAGGCCTGTTACTGCAACAGTCAC
GTATTCAAGCTGAAATTCAGGAAAGCTTGATGCGTACCCGTCTGGTACCATTCGACCGTATGTTGCCTCGTCTGCAACGT
ATCGTTCGTCAGACTTCGACCACCTTGAACCGTCCGGCCGAACTGATTGTTCAGAATACAGAAGGTGAACTGGATCGTAA
TATTCTGGAACGTCTGGTCAGTCCGTTTGAGCACATGCTGCGTAACGCGATCGACCATGGTCTGGAAGATACCGCAGAGC
GTATTGCGCTGAACAAGCCGGAAGTGGGTTCGATTGTACTGAACATCAGCCGTCAGGGTACTGATGTACTCATCTCCTTT
AGTGATGATGGTAAAGGGATTGACTCAGAAGCGATCCGTGCCAAAGCCATTGCGAAAGGCTTGCTGAAAGAAGAGCAGCA
GGTGGATCAGGAAGAGCTGTTGCAGTTCATCTTCCATCCAGGCTTCAGTACTGCGAAAGAGGTCACCCAGATTTCTGGTC
GTGGTGTGGGACTGGACGTGGTACAAAGCGAGATCAAGGCGCTCGGTGGTCATGTTTCAGTGAAATCTGAACTGGGTAAA
GGCACGACCTTTACCATTCGCGTACCGACTACAGTAGCAGTCAGCGATGCCCTGATGGTGAAAGCTGGCGATCAGCAGTA
TGCAATTTCTCTGGCACAGATCGACCGTATCGTGCGTATTGCACCAACCACTCTGGAAACTTACTTCAACAGTAAAGATG
ACTACTTCAAGATTGATGGCGTGAACTACAAACTGCGTTATCTGTCTGAGTTTGTTGCCAATCAGCCAGTGCCACGTCTG
AATAACATCGCGAACTCACTGCCAGTGTTGCTGATCAAAGGCAACAATGGTCAGAGTATTGCCTTGCTGGTAGACCAGTT
AGTCGGTTCACGTGCACAGATTGTGGTGAAACCAATTGGCCAGCAGTTTGCCAATATTGGGGTAGTTGCCGGTGCAACAA
TTCTCGGCGATGGTAGTGTCTGCCTGATTCTCGACGGTCAGAATGTTGCCCGTCAGGCACAGGCAACACAACGCATCAAA
CAGGTATCCGATCAGCAGGATCTGTCACGTCGTGGTAATGCCCGCCGTCTGGTGATGATCGTCGATGACTCCGTAACCGT
GCGTAAGGTTACTTCGCGTCTGCTCGAACGTCAGGGTTACGATGTGGTAACCGCCAAAGATGGTGTGGATGCAATTGAGC
AGCTGGAAAATGTTCGTCCGGATCTGATGCTGCTGGATATCGAGATGCCACGCATGGATGGTTTCGAAGTGACCAATCTG
GTACGCCACCACGATATTCACCGCAACTTGCCAATTATCATGATTACATCACGTACTGGCGAGAAGCATCGTGAACGTGC
CTTCAGCTTGGGCGTCACCCATTATATGGGTAAACCGTTCCAGGAAGCTGAACTGCTTGCCAATATTCAAGAACTAATCG
CTGCTCAACAGGGGTAA

Domains

Predicted by InterproScan.

Hpt domain (Hpt)

(214-296)

Hpt domain (Hpt)

(524-611)

Hpt domain (Hpt)

(25-107)

Hpt domain (Hpt)

(728-792)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1075-1210)

Response regulator receiver domain (Response_reg)

(1378-1489)

CheW-like domain (CheW)

(1217-1352)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.861

100

0.623

Multiple sequence alignment