Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   EL147_RS07795 Genome accession   NZ_LR134341
Coordinates   1592010..1593044 (+) Length   344 a.a.
NCBI ID   WP_007892152.1    Uniprot ID   G5K8H3
Organism   Streptococcus pseudoporcinus strain NCTC13786     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1587010..1598044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL147_RS07765 (NCTC13786_01560) - 1587392..1587916 (+) 525 WP_007892158.1 GNAT family N-acetyltransferase -
  EL147_RS07770 (NCTC13786_01561) brpA 1587924..1589237 (+) 1314 WP_007892137.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL147_RS07775 tnpA 1589488..1589936 (+) 449 Protein_1460 IS200/IS605 family transposase -
  EL147_RS07780 (NCTC13786_01564) - 1590143..1590427 (-) 285 WP_007892161.1 hypothetical protein -
  EL147_RS07785 (NCTC13786_01565) - 1590424..1590843 (-) 420 WP_007892132.1 HIT family protein -
  EL147_RS07790 (NCTC13786_01566) pptA 1591282..1592007 (+) 726 WP_007892113.1 ABC transporter ATP-binding protein Regulator
  EL147_RS07795 (NCTC13786_01567) pptB 1592010..1593044 (+) 1035 WP_007892152.1 ABC transporter permease Regulator
  EL147_RS07800 (NCTC13786_01568) ccrZ 1593105..1593896 (+) 792 WP_003084957.1 cell cycle regulator CcrZ -
  EL147_RS07805 (NCTC13786_01569) trmB 1593896..1594531 (+) 636 WP_007892080.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL147_RS07815 (NCTC13786_01571) rimP 1594806..1595303 (+) 498 WP_050784973.1 ribosome maturation factor RimP -
  EL147_RS07820 (NCTC13786_01572) nusA 1595365..1596519 (+) 1155 WP_007892224.1 transcription termination factor NusA -
  EL147_RS07825 (NCTC13786_01573) rnpM 1596535..1596831 (+) 297 WP_007896233.1 RNase P modulator RnpM -
  EL147_RS07830 (NCTC13786_01574) - 1596824..1597126 (+) 303 WP_007892116.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40677.05 Da        Isoelectric Point: 10.2524

>NTDB_id=1002127 EL147_RS07795 WP_007892152.1 1592010..1593044(+) (pptB) [Streptococcus pseudoporcinus strain NCTC13786]
MRQLFKQRRLTFLALHRKYLPYVLNDHFVLVLVFLLGYLLYQYSQLLNHLPENRFPIILVIMVLFLFLLGLGKPATYLEP
ADQHFLLCQERYVIKHLKESGRRSFYIWSGLGGLLLLLLYPLFLKLGFGIVTFLGVLALFVSLKWIIQKYKVDTLLAEGH
LDWDKAIAYELERQQGVLKFYALFTSVKGLSSKFKNRRYLNFLLAIFPKKSNNLWLHLYARAFLRSSDYLGLFFRLTVLS
CLSLSLIKNPYLALTLALVWNYLLFFQVLALYHHYNYYFMAQLYPKTKHLKKKNLLLFLRYLSVLAFLFQAIFCHELIIL
GGVTIIMLFLSFVYLPYKMKNIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1002127 EL147_RS07795 WP_007892152.1 1592010..1593044(+) (pptB) [Streptococcus pseudoporcinus strain NCTC13786]
ATGAGACAACTATTTAAACAACGTCGGTTGACTTTTCTAGCCTTGCACCGTAAGTACCTCCCCTATGTTTTAAATGATCA
CTTTGTTCTAGTTTTAGTTTTTCTGTTAGGTTATCTTCTTTATCAATATAGCCAATTACTCAATCATCTTCCTGAGAATC
GTTTTCCAATCATACTGGTCATAATGGTTTTATTTCTCTTTCTACTAGGTTTAGGAAAGCCAGCTACCTATCTTGAACCG
GCAGATCAGCATTTTTTGCTTTGTCAAGAAAGATATGTCATCAAGCATCTTAAAGAAAGTGGAAGACGTTCCTTTTATAT
CTGGTCGGGATTAGGTGGTCTTCTTTTACTGCTCTTATACCCTTTATTTCTTAAGTTGGGATTTGGAATAGTGACCTTCT
TAGGTGTTTTAGCTTTATTTGTCAGCCTGAAGTGGATTATCCAAAAATATAAGGTTGACACATTGTTGGCGGAAGGACAT
TTGGATTGGGACAAAGCTATTGCTTATGAATTAGAACGTCAGCAAGGCGTCTTAAAATTTTATGCTCTTTTCACAAGTGT
CAAAGGACTTTCTAGTAAGTTTAAAAATAGAAGATACCTCAATTTCTTGCTGGCTATCTTTCCTAAGAAGAGTAACAATC
TCTGGTTACACCTCTATGCTAGAGCTTTTTTGAGAAGTTCAGATTATTTAGGTCTCTTTTTTAGACTAACTGTTTTAAGC
TGTCTGAGTCTAAGTTTAATAAAAAATCCTTATCTCGCTTTGACTCTAGCTCTTGTATGGAACTACCTATTATTTTTCCA
GGTACTGGCCTTATATCATCATTATAATTACTATTTTATGGCTCAGCTTTATCCTAAGACCAAGCATTTGAAAAAAAAGA
ATTTATTACTCTTTTTAAGATACCTATCAGTTTTGGCCTTTCTGTTCCAAGCTATTTTTTGTCATGAACTAATCATTTTA
GGAGGAGTAACTATTATAATGCTCTTTTTAAGTTTTGTTTATCTCCCTTATAAGATGAAGAACATAATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(3-151)

Bacterial ABC transporter protein EcsB (EcsB)

(160-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5K8H3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

44.669

100

0.451
  pptB Streptococcus thermophilus LMD-9

43.516

100

0.439