Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | ABFG87_RS08015 | Genome accession | NZ_CP156074 |
| Coordinates | 1694324..1694623 (-) | Length | 99 a.a. |
| NCBI ID | WP_136772578.1 | Uniprot ID | A0A4U0Q3K7 |
| Organism | Chitiniphilus eburneus strain YS-30 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1689324..1699623
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFG87_RS08000 | - | 1690426..1691106 (+) | 681 | WP_136772581.1 | Bax inhibitor-1/YccA family protein | - |
| ABFG87_RS08005 | - | 1691270..1693528 (+) | 2259 | WP_169307289.1 | PAS domain-containing sensor histidine kinase | - |
| ABFG87_RS08010 | - | 1693525..1694139 (+) | 615 | WP_136772579.1 | response regulator transcription factor | - |
| ABFG87_RS08015 | comE | 1694324..1694623 (-) | 300 | WP_136772578.1 | ComEA family DNA-binding protein | Machinery gene |
| ABFG87_RS08020 | hpnC | 1694728..1695561 (+) | 834 | WP_136772577.1 | squalene synthase HpnC | - |
| ABFG87_RS08025 | - | 1695558..1696082 (+) | 525 | WP_246038520.1 | thermonuclease family protein | - |
| ABFG87_RS08030 | - | 1696118..1696354 (-) | 237 | WP_136772576.1 | lipoprotein | - |
| ABFG87_RS08035 | cyaY | 1696411..1696722 (+) | 312 | WP_136772575.1 | iron donor protein CyaY | - |
| ABFG87_RS08040 | - | 1696758..1697138 (+) | 381 | WP_246038518.1 | YqaA family protein | - |
| ABFG87_RS08045 | - | 1697216..1698799 (+) | 1584 | WP_136772573.1 | M48 family metalloprotease | - |
| ABFG87_RS08050 | - | 1698712..1699158 (-) | 447 | WP_211243396.1 | DUF1841 family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10231.04 Da Isoelectric Point: 10.6512
>NTDB_id=1001629 ABFG87_RS08015 WP_136772578.1 1694324..1694623(-) (comE) [Chitiniphilus eburneus strain YS-30]
MMQKIVGLLVGLLLAASAWAAVDINTATAEQLETLPGIGAAKAKAIVDYRGKNGPFKSTQDLTRVPGIKEGTYARLKDEV
SVGKPAAKAAPAKAAAKKK
MMQKIVGLLVGLLLAASAWAAVDINTATAEQLETLPGIGAAKAKAIVDYRGKNGPFKSTQDLTRVPGIKEGTYARLKDEV
SVGKPAAKAAPAKAAAKKK
Nucleotide
Download Length: 300 bp
>NTDB_id=1001629 ABFG87_RS08015 WP_136772578.1 1694324..1694623(-) (comE) [Chitiniphilus eburneus strain YS-30]
ATGATGCAAAAGATCGTGGGCCTGCTGGTCGGGTTGCTGTTGGCGGCTTCGGCCTGGGCGGCGGTGGATATTAACACCGC
CACCGCCGAGCAACTGGAAACGCTGCCCGGAATCGGCGCGGCCAAGGCAAAGGCAATCGTCGATTACCGGGGCAAGAACG
GGCCGTTCAAGAGTACGCAGGACCTGACCCGCGTGCCGGGCATCAAGGAAGGCACCTATGCGCGCCTCAAGGATGAGGTA
AGCGTCGGCAAGCCAGCCGCCAAAGCAGCACCGGCCAAGGCTGCGGCCAAGAAAAAGTAA
ATGATGCAAAAGATCGTGGGCCTGCTGGTCGGGTTGCTGTTGGCGGCTTCGGCCTGGGCGGCGGTGGATATTAACACCGC
CACCGCCGAGCAACTGGAAACGCTGCCCGGAATCGGCGCGGCCAAGGCAAAGGCAATCGTCGATTACCGGGGCAAGAACG
GGCCGTTCAAGAGTACGCAGGACCTGACCCGCGTGCCGGGCATCAAGGAAGGCACCTATGCGCGCCTCAAGGATGAGGTA
AGCGTCGGCAAGCCAGCCGCCAAAGCAGCACCGGCCAAGGCTGCGGCCAAGAAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
53.261 |
92.929 |
0.495 |
| comE | Neisseria gonorrhoeae MS11 |
53.261 |
92.929 |
0.495 |
| comE | Neisseria gonorrhoeae MS11 |
53.261 |
92.929 |
0.495 |
| comE | Neisseria gonorrhoeae MS11 |
53.261 |
92.929 |
0.495 |