Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABFG87_RS01175 Genome accession   NZ_CP156074
Coordinates   268926..269312 (-) Length   128 a.a.
NCBI ID   WP_136774096.1    Uniprot ID   A0A4U0PRV6
Organism   Chitiniphilus eburneus strain YS-30     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 263926..274312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFG87_RS01160 - 265763..267919 (-) 2157 WP_136774093.1 methyl-accepting chemotaxis protein -
  ABFG87_RS01165 - 267976..268488 (-) 513 WP_136774094.1 chemotaxis protein CheW -
  ABFG87_RS01170 - 268523..268885 (-) 363 WP_136774095.1 PleD family two-component system response regulator -
  ABFG87_RS01175 pilG 268926..269312 (-) 387 WP_136774096.1 twitching motility response regulator PilG Regulator
  ABFG87_RS01180 - 269530..271146 (-) 1617 WP_136774097.1 methyl-accepting chemotaxis protein -
  ABFG87_RS01185 - 271246..272412 (-) 1167 WP_136774098.1 diguanylate cyclase -
  ABFG87_RS01190 - 272758..273141 (+) 384 WP_169307406.1 DUF4902 domain-containing protein -
  ABFG87_RS01195 - 273280..273951 (+) 672 WP_281279781.1 acyl-homoserine-lactone synthase -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 13938.08 Da        Isoelectric Point: 6.4566

>NTDB_id=1001619 ABFG87_RS01175 WP_136774096.1 268926..269312(-) (pilG) [Chitiniphilus eburneus strain YS-30]
MSNLAGVKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKISDHQPDLIFVDVMMPRLDGYQTCSLIKKNPRYKS
TPVVMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLAAVGAHVQSAA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=1001619 ABFG87_RS01175 WP_136774096.1 268926..269312(-) (pilG) [Chitiniphilus eburneus strain YS-30]
ATGTCGAATCTTGCCGGCGTCAAGGTGATGGTGATCGACGACAGCAATACGATCCGCCGCAGCGCCGAAATCTTTCTCGG
CCAGGCCGGATGTGAAGTCATCCTCGCCGAGGATGGATTCGATGCGCTGGCCAAGATCAGCGATCACCAGCCCGATCTGA
TCTTTGTCGATGTGATGATGCCGCGTCTGGACGGATACCAGACCTGCTCCCTGATCAAGAAGAACCCGCGTTACAAGTCC
ACCCCCGTTGTCATGCTGTCCTCCAAGGATGGCCTGTTCGACCGTGCCAGGGGGCGCATGGTGGGCTCGGACGAATACCT
GACCAAACCCTTTACCAAGGACAGTCTGCTTGCCGCCGTGGGCGCCCACGTGCAGTCGGCCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U0PRV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.667

96.094

0.641
  vicR Streptococcus mutans UA159

39.831

92.188

0.367

Multiple sequence alignment