Detailed information
Bioinformatically predicted
Overview
| Name | recU | Type | Machinery gene |
| Locus tag | EL092_RS02955 | Genome accession | NZ_LR134291 |
| Coordinates | 636429..637031 (-) | Length | 200 a.a. |
| NCBI ID | WP_012000083.1 | Uniprot ID | A8AVU3 |
| Organism | Streptococcus gordonii strain NCTC7868 | ||
| Function | plasmid transformation; homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 631429..642031
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL092_RS02940 (NCTC7868_00582) | - | 632213..632773 (+) | 561 | WP_012000080.1 | GNAT family N-acetyltransferase | - |
| EL092_RS02945 (NCTC7868_00583) | pepC | 632852..634186 (+) | 1335 | WP_012000081.1 | aminopeptidase C | - |
| EL092_RS02950 (NCTC7868_00584) | pbp1a | 634298..636436 (-) | 2139 | WP_012000082.1 | penicillin-binding protein PBP1A | - |
| EL092_RS02955 (NCTC7868_00585) | recU | 636429..637031 (-) | 603 | WP_012000083.1 | Holliday junction resolvase RecU | Machinery gene |
| EL092_RS02960 (NCTC7868_00586) | - | 637097..637624 (+) | 528 | WP_012000084.1 | DUF1273 domain-containing protein | - |
| EL092_RS02965 (NCTC7868_00587) | gpsB | 637694..638044 (+) | 351 | WP_012000085.1 | cell division regulator GpsB | - |
| EL092_RS02975 (NCTC7868_00589) | - | 638585..639751 (+) | 1167 | WP_012000086.1 | THUMP domain-containing class I SAM-dependent RNA methyltransferase | - |
| EL092_RS02980 (NCTC7868_00590) | - | 639754..641160 (+) | 1407 | WP_012000087.1 | cell division site-positioning protein MapZ family protein | - |
| EL092_RS02985 (NCTC7868_00591) | luxS | 641221..641703 (-) | 483 | WP_008808586.1 | S-ribosylhomocysteine lyase | Regulator |
Sequence
Protein
Download Length: 200 a.a. Molecular weight: 23189.78 Da Isoelectric Point: 9.8397
>NTDB_id=1000176 EL092_RS02955 WP_012000083.1 636429..637031(-) (recU) [Streptococcus gordonii strain NCTC7868]
MVNYPHKLTSKNNIKKVKKETVDFANRGMTFEKMINDTNDYYLSRGLAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQA
STTDYSGVYRGHYIDFEAKETRQKQSMPMKNFHAHQIEHMNQVLNQGGICFVLLHFSSLKETYLLPAPYLIEFYKIDKGG
KSMPLDYIQKHGYLIEQNILPSVPYLDIISKNLLGGHSNE
MVNYPHKLTSKNNIKKVKKETVDFANRGMTFEKMINDTNDYYLSRGLAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQA
STTDYSGVYRGHYIDFEAKETRQKQSMPMKNFHAHQIEHMNQVLNQGGICFVLLHFSSLKETYLLPAPYLIEFYKIDKGG
KSMPLDYIQKHGYLIEQNILPSVPYLDIISKNLLGGHSNE
Nucleotide
Download Length: 603 bp
>NTDB_id=1000176 EL092_RS02955 WP_012000083.1 636429..637031(-) (recU) [Streptococcus gordonii strain NCTC7868]
ATGGTCAACTATCCGCATAAGCTTACATCTAAAAATAACATAAAAAAAGTGAAAAAAGAGACTGTCGATTTCGCTAATCG
GGGAATGACTTTTGAAAAAATGATTAACGACACCAATGACTATTACCTTAGCCGTGGATTAGCTGTTATTCATAAAAAGC
CTACACCCGTGCAAATTGTCAAAGTTGATTATCCTAAGCGAAGCCGTGCCAAGATTGTCGAGGCCTACTTTCGCCAAGCA
TCTACTACGGACTACTCAGGAGTTTACCGTGGGCATTATATTGACTTTGAAGCCAAGGAAACGCGGCAAAAACAATCCAT
GCCTATGAAGAACTTTCATGCACACCAGATTGAGCATATGAATCAAGTGCTCAATCAAGGCGGAATTTGCTTTGTCTTAC
TTCACTTTTCTAGCCTGAAGGAAACCTACCTCCTTCCTGCTCCCTACTTAATTGAGTTTTACAAGATTGATAAGGGTGGG
AAATCCATGCCCCTGGATTATATTCAGAAACATGGTTATCTCATTGAACAAAACATCCTTCCCAGCGTACCTTATCTTGA
TATAATCTCAAAAAATTTACTAGGTGGTCACTCTAATGAATAA
ATGGTCAACTATCCGCATAAGCTTACATCTAAAAATAACATAAAAAAAGTGAAAAAAGAGACTGTCGATTTCGCTAATCG
GGGAATGACTTTTGAAAAAATGATTAACGACACCAATGACTATTACCTTAGCCGTGGATTAGCTGTTATTCATAAAAAGC
CTACACCCGTGCAAATTGTCAAAGTTGATTATCCTAAGCGAAGCCGTGCCAAGATTGTCGAGGCCTACTTTCGCCAAGCA
TCTACTACGGACTACTCAGGAGTTTACCGTGGGCATTATATTGACTTTGAAGCCAAGGAAACGCGGCAAAAACAATCCAT
GCCTATGAAGAACTTTCATGCACACCAGATTGAGCATATGAATCAAGTGCTCAATCAAGGCGGAATTTGCTTTGTCTTAC
TTCACTTTTCTAGCCTGAAGGAAACCTACCTCCTTCCTGCTCCCTACTTAATTGAGTTTTACAAGATTGATAAGGGTGGG
AAATCCATGCCCCTGGATTATATTCAGAAACATGGTTATCTCATTGAACAAAACATCCTTCCCAGCGTACCTTATCTTGA
TATAATCTCAAAAAATTTACTAGGTGGTCACTCTAATGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recU | Bacillus subtilis subsp. subtilis str. 168 |
49.254 |
100 |
0.495 |