Detailed information
Bioinformatically predicted
Overview
| Name | comL/pilP | Type | Machinery gene |
| Locus tag | EL191_RS02980 | Genome accession | NZ_LR134290 |
| Coordinates | 641155..641682 (+) | Length | 175 a.a. |
| NCBI ID | WP_017363397.1 | Uniprot ID | - |
| Organism | Ectopseudomonas mendocina strain NCTC10897 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 636155..646682
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL191_RS02960 (NCTC10897_00598) | - | 636307..638718 (-) | 2412 | WP_041976365.1 | penicillin-binding protein 1A | - |
| EL191_RS02965 (NCTC10897_00599) | pilM | 638900..639964 (+) | 1065 | WP_013713726.1 | pilus assembly protein PilM | Machinery gene |
| EL191_RS02970 (NCTC10897_00600) | pilN | 639964..640548 (+) | 585 | WP_017363399.1 | PilN domain-containing protein | Machinery gene |
| EL191_RS02975 (NCTC10897_00601) | pilO | 640535..641158 (+) | 624 | WP_017363398.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EL191_RS02980 | comL/pilP | 641155..641682 (+) | 528 | WP_017363397.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| EL191_RS02985 (NCTC10897_00602) | pilQ | 641737..643817 (+) | 2081 | Protein_599 | type IV pilus secretin PilQ | - |
| EL191_RS02990 (NCTC10897_00603) | aroK | 643823..644341 (+) | 519 | WP_026042192.1 | shikimate kinase AroK | - |
| EL191_RS02995 (NCTC10897_00604) | aroB | 644393..645496 (+) | 1104 | WP_017363395.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19183.01 Da Isoelectric Point: 8.9304
>NTDB_id=1000096 EL191_RS02980 WP_017363397.1 641155..641682(+) (comL/pilP) [Ectopseudomonas mendocina strain NCTC10897]
MRFVRFVLLFLLSVALLGCGGREDFSDLQGFMAEVKARPKGSIEPLPKFQPYEAFSYSASSLRSPFQPPIKVEAVSRPKG
SKEIKPDERRAREFLEGFNIESFEMVGTLSNDAGTFALVSGAGGVHRVKVGDYLGRNHGRIVAVQAAAIEVVEIVPDGDG
GWLERPRSLALKERS
MRFVRFVLLFLLSVALLGCGGREDFSDLQGFMAEVKARPKGSIEPLPKFQPYEAFSYSASSLRSPFQPPIKVEAVSRPKG
SKEIKPDERRAREFLEGFNIESFEMVGTLSNDAGTFALVSGAGGVHRVKVGDYLGRNHGRIVAVQAAAIEVVEIVPDGDG
GWLERPRSLALKERS
Nucleotide
Download Length: 528 bp
>NTDB_id=1000096 EL191_RS02980 WP_017363397.1 641155..641682(+) (comL/pilP) [Ectopseudomonas mendocina strain NCTC10897]
GTGAGGTTTGTCAGATTTGTTTTGCTTTTTCTTCTTTCAGTGGCACTGTTGGGGTGTGGTGGGCGTGAGGATTTCTCCGA
CTTGCAAGGTTTCATGGCGGAAGTTAAGGCGAGGCCAAAAGGCTCTATCGAGCCCTTACCCAAGTTTCAGCCCTATGAGG
CTTTTTCCTACAGCGCTTCTTCCCTTCGCAGCCCATTTCAGCCTCCGATTAAGGTAGAGGCTGTGAGTCGTCCAAAAGGT
TCAAAAGAGATCAAGCCTGATGAACGACGTGCTCGAGAGTTTCTTGAAGGGTTTAATATAGAGAGTTTCGAGATGGTTGG
TACTCTTTCTAACGATGCCGGTACGTTTGCTCTGGTTAGCGGTGCAGGCGGGGTGCATCGAGTTAAGGTGGGGGATTACC
TTGGAAGAAATCATGGCCGAATAGTGGCGGTGCAAGCTGCCGCTATCGAGGTTGTCGAAATAGTCCCTGATGGTGATGGT
GGTTGGTTGGAGCGACCGCGAAGCCTTGCGCTCAAAGAGCGCTCTTAG
GTGAGGTTTGTCAGATTTGTTTTGCTTTTTCTTCTTTCAGTGGCACTGTTGGGGTGTGGTGGGCGTGAGGATTTCTCCGA
CTTGCAAGGTTTCATGGCGGAAGTTAAGGCGAGGCCAAAAGGCTCTATCGAGCCCTTACCCAAGTTTCAGCCCTATGAGG
CTTTTTCCTACAGCGCTTCTTCCCTTCGCAGCCCATTTCAGCCTCCGATTAAGGTAGAGGCTGTGAGTCGTCCAAAAGGT
TCAAAAGAGATCAAGCCTGATGAACGACGTGCTCGAGAGTTTCTTGAAGGGTTTAATATAGAGAGTTTCGAGATGGTTGG
TACTCTTTCTAACGATGCCGGTACGTTTGCTCTGGTTAGCGGTGCAGGCGGGGTGCATCGAGTTAAGGTGGGGGATTACC
TTGGAAGAAATCATGGCCGAATAGTGGCGGTGCAAGCTGCCGCTATCGAGGTTGTCGAAATAGTCCCTGATGGTGATGGT
GGTTGGTTGGAGCGACCGCGAAGCCTTGCGCTCAAAGAGCGCTCTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL/pilP | Acinetobacter baylyi ADP1 |
37.87 |
96.571 |
0.366 |
| pilP | Acinetobacter baumannii D1279779 |
36.994 |
98.857 |
0.366 |