Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   EL191_RS02380 Genome accession   NZ_LR134290
Coordinates   504128..504535 (+) Length   135 a.a.
NCBI ID   WP_003458788.1    Uniprot ID   A0A1H0UVL6
Organism   Ectopseudomonas mendocina strain NCTC10897     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 499128..509535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL191_RS02350 (NCTC10897_00476) - 499292..500299 (-) 1008 WP_011920651.1 aspartate carbamoyltransferase catalytic subunit -
  EL191_RS02355 (NCTC10897_00477) pyrR 500311..500814 (-) 504 WP_041976204.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EL191_RS02360 ruvX 500845..501283 (-) 439 Protein_474 Holliday junction resolvase RuvX -
  EL191_RS02365 (NCTC10897_00478) - 501280..501849 (-) 570 WP_041976207.1 YqgE/AlgH family protein -
  EL191_RS02370 (NCTC10897_00479) - 501944..502840 (-) 897 WP_041976209.1 energy transducer TonB -
  EL191_RS02375 (NCTC10897_00480) gshB 502929..503885 (-) 957 WP_013713611.1 glutathione synthase -
  EL191_RS02380 (NCTC10897_00481) pilG 504128..504535 (+) 408 WP_003458788.1 twitching motility response regulator PilG Regulator
  EL191_RS02385 (NCTC10897_00482) pilH 504583..504948 (+) 366 WP_013713612.1 twitching motility response regulator PilH -
  EL191_RS02390 (NCTC10897_00483) - 504994..505533 (+) 540 WP_013713613.1 chemotaxis protein CheW -
  EL191_RS02395 (NCTC10897_00484) - 505614..507650 (+) 2037 WP_013713614.1 methyl-accepting chemotaxis protein -
  EL191_RS02400 (NCTC10897_00485) - 507711..508571 (+) 861 WP_026041865.1 protein-glutamate O-methyltransferase -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14771.13 Da        Isoelectric Point: 6.7123

>NTDB_id=1000090 EL191_RS02380 WP_003458788.1 504128..504535(+) (pilG) [Ectopseudomonas mendocina strain NCTC10897]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1000090 EL191_RS02380 WP_003458788.1 504128..504535(+) (pilG) [Ectopseudomonas mendocina strain NCTC10897]
ATGGAACAGCATTCCGAGGGTTTGAAAGTGATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACTCTGCT
GAAAAAAGTGGGTTGTGACGTCATCACCGCGGTCGATGGCTTCGATGCCCTGGCCAAGATTGCCGACACTCACCCCAGTA
TCATCTTTGTCGACATCATGATGCCGCGTCTCGATGGGTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGCATCGTCGGCTCCGATCAATA
CCTGACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGTGCGATCAAAGCCCACGTGCCGGACTTCACCCCGGTGGAACAAG
CCTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1H0UVL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704

  vicR Streptococcus mutans UA159

42.857

93.333

0.4


Multiple sequence alignment