Detailed information NTG1000082

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: EL191_RS00415
• Genome accession: NZ_LR134290
• Coordinates: 95455..96492 (+)
• Length: 345 a.a.
• NCBI ID: WP_017361050.1
• Uniprot ID: A0ABM5W2J6
• Organism: Ectopseudomonas mendocina strain NCTC10897
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 90455..101492

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL191_RS00390 (NCTC10897_00078)	-	90707..91033 (-)	327	WP_013713226.1	tetratricopeptide repeat protein	-
EL191_RS00395 (NCTC10897_00079)	trkA	91112..92485 (-)	1374	WP_013713227.1	Trk system potassium transporter TrkA	-
EL191_RS00400 (NCTC10897_00080)	rsmB	92497..93810 (-)	1314	WP_041975713.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
EL191_RS00405 (NCTC10897_00081)	fmt	93807..94739 (-)	933	WP_041975716.1	methionyl-tRNA formyltransferase	-
EL191_RS00410 (NCTC10897_00082)	def	94796..95302 (-)	507	WP_013713230.1	peptide deformylase	-
EL191_RS00415 (NCTC10897_00083)	tsaP	95455..96492 (+)	1038	WP_017361050.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
EL191_RS00420 (NCTC10897_00084)	dprA	96573..97691 (+)	1119	WP_041975719.1	DNA-processing protein DprA	Machinery gene
EL191_RS00425 (NCTC10897_00085)	-	97775..98332 (+)	558	WP_017361052.1	L-threonylcarbamoyladenylate synthase	-
EL191_RS00430 (NCTC10897_00086)	-	98407..99384 (-)	978	WP_041975721.1	NADPH:quinone reductase	-
EL191_RS00435 (NCTC10897_00087)	hemF	99532..100440 (+)	909	WP_026041908.1	oxygen-dependent coproporphyrinogen oxidase	-
EL191_RS00440 (NCTC10897_00088)	aroE	100603..101424 (+)	822	WP_041975723.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 38025.34 Da
• Isoelectric Point: 5.5021

>NTDB_id=1000082 EL191_RS00415 WP_017361050.1 95455..96492(+) (tsaP) [Ectopseudomonas mendocina strain NCTC10897]
MRKSLLALLLAAGGLALTCLAQAAVQLKDGHPDRYTVVKGDTLWDISGKFLSQPWKWPEIWHANPQVANPHLIYPGDTLN
LVYVDGQPRLMLNRGESRGTIKLSPQVRSTPMAEAIPTIPLEAINSFLLSNRIVNTPEEFNGKPYVVAGNAERVISGAGD
RIYVRGQFDEEHPVYGIFRQGKTYVDPESKEFLGINADDIGTGEIVAEEGDVGTLVLSRSTQEVRLGDRLFPTEERAINS
TFMPSEPSGEINGLILDVPRGVNQIGQFDVVTLNKGARDGLEIGNVLAVYKTGETVRDRVTGERVKIPDERSGLLMVFRT
YDKLSYGLILQASRQLSVMDKVRNP

Nucleotide

• Length: 1038 bp

>NTDB_id=1000082 EL191_RS00415 WP_017361050.1 95455..96492(+) (tsaP) [Ectopseudomonas mendocina strain NCTC10897]
ATGAGGAAATCACTACTCGCCCTGCTCCTGGCAGCTGGCGGATTGGCCCTGACCTGCTTGGCTCAGGCCGCAGTGCAACT
CAAGGACGGTCATCCGGACCGTTATACCGTGGTCAAGGGCGATACGCTCTGGGATATCTCCGGTAAATTCCTCAGTCAAC
CGTGGAAGTGGCCGGAGATCTGGCACGCCAACCCACAAGTTGCCAACCCGCACCTGATCTATCCCGGCGACACCCTCAAT
CTGGTCTATGTCGACGGGCAGCCGCGCCTGATGCTCAACCGCGGTGAATCGCGCGGCACCATCAAACTGTCGCCGCAAGT
GCGCAGCACACCGATGGCCGAGGCGATCCCGACCATCCCGCTGGAGGCGATCAACAGCTTCCTGCTGAGCAACCGCATCG
TCAACACTCCGGAAGAGTTCAACGGCAAGCCCTACGTCGTCGCCGGCAATGCCGAGCGTGTGATCAGCGGTGCGGGTGAT
CGCATTTATGTTCGCGGCCAGTTCGATGAAGAGCATCCGGTCTACGGTATCTTCCGCCAGGGCAAGACCTACGTGGACCC
GGAGTCGAAAGAGTTTCTGGGTATCAATGCCGACGACATCGGTACCGGTGAGATCGTCGCCGAGGAAGGTGATGTCGGTA
CGCTGGTGCTGAGCCGCTCGACGCAGGAAGTGCGCCTGGGTGACCGTCTGTTCCCCACCGAAGAGCGTGCGATCAACTCC
ACTTTCATGCCCAGCGAGCCGAGCGGCGAGATCAATGGCCTGATTCTCGATGTGCCACGTGGCGTCAACCAGATTGGCCA
GTTCGATGTGGTCACCCTGAACAAGGGCGCGCGCGATGGTCTGGAGATCGGCAACGTGCTGGCGGTGTACAAGACCGGCG
AAACCGTACGCGATCGTGTCACTGGTGAGCGAGTGAAGATTCCGGATGAGCGCTCCGGCCTGCTGATGGTCTTCCGCACC
TACGACAAGCTCAGCTACGGCCTGATTCTGCAGGCCAGCCGCCAGCTCTCGGTGATGGACAAGGTCCGCAACCCGTAA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (35-80)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	35.967	100	0.383