NTDB

Browse by species

This page lists the natural transformation-associated gene counts (experimentally validated and in silico predicted) per species. Click the hyperlink of your species of interest to browse strains.

Alphabet: All A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Species	Number of strains	Number of Exp. NT genes	Number of Pred. NT genes
Vibrio cholerae	133	46	4565
Vibrio campbellii	23	16	713
Vibrio parahaemolyticus	122	12	3745
Vibrio sp. SCSIO 43186	1	0	23
Vibrio sp. SCSIO 43135	1	0	31
Virgibacillus pantothenticus	1	0	6
Vibrio ostreae	1	0	26
Vreelandella profundi	1	0	4
Vibrio sp. SCSIO 43145	1	0	23
Virgibacillus salidurans	1	0	7
Vibrio sp. SCSIO 43155	1	0	28
Vibrio sp. SCSIO 43139	1	0	23
Vibrio sp. SCSIO 43009	1	0	32
Vibrio sp. SCSIO 43136	1	0	27
Vibrio sp. SCSIO 43140	1	0	23
Vibrio sp. ED002	1	0	30
Vibrio sp. SCSIO 43153	1	0	30
Vogesella sp. XCS3	1	0	16
Vagococcus sp. CY52-2	1	0	4
Vibrio sp. JC009	1	0	19
Vibrio sinaloensis	1	0	25
Vibrio sp. J383	1	0	29
Vibrio japonicus	1	0	28
Virgibacillus sp. CBA3643	1	0	8
Vibrio sp. DW001	1	0	21
Vitreoscilla stercoraria	1	0	14
Vibrio sp. SCSIO 43097	1	0	31
Vagococcus lutrae	10	0	75
Vibrio sp. VB16	1	0	22
Vibrio maritimus	1	0	24
Vitreoscilla massiliensis	1	0	15
Vagococcus fluvialis	5	0	49
Vibrio sp. SCSIO 43133	1	0	24
Virgibacillus sp. MSP4-1	1	0	6
Vibrio astriarenae	1	0	25
Vreelandella piezotolerans	2	0	8
Vibrio ziniensis	1	0	27
Vagococcus hydrophili	1	0	6
Vagococcus coleopterorum	1	0	8
Vibrio metschnikovii	5	0	155
Variovorax sp. RKNM96	1	0	12
Venatoribacter cucullus	2	0	28
Vibrio sp. THAF64	1	0	20
Vibrio algicola	1	0	25
Vibrio sp. THAF191d	1	0	20
Vibrio sp. THAF191c	1	0	20
Vibrio sp. HDW18	1	0	27
Vibrio europaeus	3	0	93
Vibrio sp. SCSIO 43132	1	0	28
Vibrio bathopelagicus	1	0	30
Viridibacillus arvi	1	0	8
Vibrio sp. ED004	1	0	28
Variovorax sp. PDNC026	1	0	10
Vagococcus luciliae	1	0	5
Variovorax sp. 38R	1	0	9
Vagococcus carniphilus	1	0	7
Vallitalea pronyensis	1	0	2
Vallitalea guaymasensis	1	0	2
Variovorax sp. PAMC26660	1	0	8
Variovorax sp. PAMC28562	1	0	10
Vibrio sp. sp1	1	0	31
Vibrio sp. ABG19	1	0	26
Virgibacillus natechei	1	0	8
Vibrio sp. MA40-2	1	0	17
Vagococcus salmoninarum	4	0	32
Variovorax sp. SCN45	1	0	9
Vibrio sp. B1ASS3	1	0	29
Vibrio sp. B1FIG11	1	0	29
Vibrio sp. B1FLJ16	2	0	56
Variovorax sp. UC122_21	1	0	10
Variovorax sp. UC74_104	1	0	8
Vibrio sp. F13	1	0	28
Variovorax sp. Varisp41	1	0	9
Vreelandella sp. F11	1	0	6
Vaginella massiliensis	1	0	2
Vibrio sp. D3	1	0	32
Veillonella dispar	1	0	2
Variovorax sp. PBL-H6	1	0	10
Vibrio tapetis	1	0	26
Veillonella rodentium	1	0	2
Varibaculum prostatecancerukia	1	0	1
Vibrio sp. 16	1	0	32
Vibrio antiquarius	1	0	32
Verminephrobacter eiseniae	1	0	12
Vaginimicrobium propionicum	1	0	1
Vibrio paracholerae	1	0	30
Variovorax sp. SRS16	1	0	12
Variovorax sp. RA8	1	0	11
Variovorax sp. PBL-E5	1	0	13
Variovorax sp. PBS-H4	1	0	11
Variovorax sp. WDL1	1	0	11
Vibrio sp. BS-M-Sm-2	1	0	56
Vibrio sp. HB236076	1	0	14
Vibrio sp. SNU_ST1	1	0	29
Vibrio sp. YMD68	1	0	27
Vibrio aestuarianus	1	0	30
Vibrio sp. NH-UV-68	1	0	24
Vreelandella neptunia	1	0	6
Variovorax sp. EBFNA2	1	0	9
Varunaivibrio sulfuroxidans	1	0	2
Vibrio sp. SCSIO 43137	1	0	23
Vagococcus intermedius	2	0	18
Vibrio aquimaris	1	0	21
Veillonella rogosae	2	0	4
Vibrio misgurnus	1	0	29
Vibrio chaetopteri	1	0	24
Vagococcus jeotgali	1	0	5
Vibrio iocasae	1	0	18
Variovorax sp. 350MFTsu5.1	1	0	10
Variovorax sp. 375MFSha3.1	1	0	9
Variovorax sp. 278MFTsu5.1	1	0	10
Variovorax sp. 160MFSha2.1	1	0	9
Vibrio sp. NTOU-M3	1	0	31
Vreelandella sp. SM1641	1	0	7
Variovorax sp. KK3	1	0	12
Variovorax sp. NFACC26	1	0	9
Vandammella animalimorsus	2	0	19
Vibrio diazotrophicus	1	0	29
Variovorax sp. NFACC29	1	0	8
Variovorax sp. NFACC28	1	0	9
Variovorax sp. NFACC27	1	0	9
Vibrio sp. J502	1	0	32
Vagococcus zengguangii	1	0	10
Vibrio ruber	2	0	41
Vibrio rhizosphaerae	1	0	20
Vibrio spartinae	2	0	40
Vibrio zhugei	2	0	34
Vibrio artabrorum	1	0	28
Vibrio penaeicida	5	0	139
Vibrio rarus	1	0	17
Vibrio porteresiae	2	0	36
Vibrio neonatus	1	0	19
Vibrio mangrovi	1	0	20
Vibrio palustris	1	0	19
Vibrio pectenicida	1	0	22
Vibrio plantisponsor	1	0	29
Vibrio atlanticus	2	0	59
Vibrio celticus	1	0	27
Vibrio gigantis	2	0	57
Vibrio gallaecicus	1	0	27
Vibrio kanaloae	5	0	140
Vibrio splendidus	7	0	203
Vibrio pelagius	2	0	53
Vibrio lentus	2	0	57
Vibrio fortis	1	0	29
Vibrio echinoideorum	1	0	29
Vibrio coralliirubri	1	0	28
Vibrio chagasii	2	0	59
Vibrio cortegadensis	1	0	30
Vibrio crassostreae	2	0	59
Vibrio cyclitrophicus	23	0	659
Vibrio ishigakensis	1	0	18
Vibrio inusitatus	1	0	17
Variibacter gotjawalensis	1	0	2
Vibrio tritonius	2	0	37
Vibrio casei	1	0	23
Vibrio rumoiensis	1	0	22
Vibrio taketomensis	2	0	51
Vibrio aphrogenes	1	0	25
Verrucomicrobium spinosum	1	0	1
Vibrio nigripulchritudo	5	0	146
Vibrio furnissii	12	0	368
Vibrio anguillarum	15	0	474
Vibrio sp. EJY3	1	0	29
Variovorax paradoxus	16	0	156
Vibrio alginolyticus	48	0	1500
Vibrio panuliri	1	0	23
Vibrio ponticus	1	0	23
Vibrio aerogenes	1	0	14
Vescimonas coprocola	1	0	4
Vibrio breoganii	2	0	34
Vibrio comitans	1	0	18
Vibrio gazogenes	4	0	80
Vibrio gallicus	1	0	16
Vescimonas fastidiosa	1	0	3
Vreelandella aquamarina	6	0	44
Vibrio alfacsensis	4	0	110
Vibrio rotiferianus	3	0	94
Vibrio gangliei	1	0	25
Veillonella nakazawae	1	0	2
Veillonella orientalis	1	0	2
Vibrio pomeroyi	2	0	57
Vibrio tasmaniensis	1	0	30
Virgibacillus phasianinus	1	0	7
Veillonella atypica	1	0	2
Vibrio tarriae	1	0	33
Vitreoscilla filiformis	1	0	10
Vibrio qinghaiensis	1	0	31
Virgibacillus necropolis	2	0	14
Vibrio owensii	6	0	175
Vitreoscilla sp. C1	1	0	14
Virgibacillus halodenitrificans	4	0	28
Vibrio syngnathi	1	0	29
Vibrio mediterranei	2	0	47
Virgibacillus dokdonensis	1	0	6
Vagococcus penaei	1	0	6
Variovorax boronicumulans	2	0	17
Vreelandella alkaliphila	1	0	3
Vibrio metoecus	5	0	160
Vibrio navarrensis	4	0	112
Vibrio cincinnatiensis	4	0	114
Vibrio cidicii	1	0	28
Vreelandella titanicae	4	0	22
Vagococcus xieshaowenii	1	0	12
Vreelandella venusta	5	0	27
Virgibacillus sp. Bac330	1	0	8
Vibrio hyugaensis	1	0	30
Vibrio jasicida	1	0	33
Variovorax sp. PMC12	1	0	10
Vibrio sp. dhg	1	0	29
Virgibacillus sp. Bac332	1	0	6
Virgibacillus sp. 6R	1	0	7
Vagococcus teuberi	1	0	5
Variovorax sp. V15	1	0	9
Variovorax sp. V11	1	0	11
Variovorax sp. V116	1	0	10
Variovorax sp. V118	1	0	8
Variovorax sp. V35	1	0	10
Variovorax sp. V213	1	0	11
Vibrio fluvialis	17	0	532
Vibrio apostichopi	1	0	28
Vulcanimicrobium alpinum	1	0	1
Vibrio toranzoniae	1	0	29
Vibrio vulnificus	30	0	854
Vibrio sp. STUT-A11	1	0	29
Vibrio sp. STUT-A16	1	0	31
Variovorax sp. V59	1	0	11
Variovorax sp. V93	1	0	11
Vibrio diabolicus	8	0	251
Vulgatibacter incomptus	1	0	5
Vibrio mimicus	5	0	161
Variovorax sp. PAMC 28711	1	0	9
Vibrio scophthalmi	5	0	125
Vibrio natriegens	9	0	316
Vibrio tubiashii	2	0	62
Veillonella parvula	8	0	16
Variovorax sp. V77	1	0	10
Vibrio harveyi	29	0	834
Virgibacillus sp. SK37	1	0	7
Vibrio coralliilyticus	7	0	176
Vibrio sp. THAF190c	1	0	26

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Experimentally validated

Bioinformatically predicted