NTDB

Browse by species

This page lists the natural transformation-associated gene counts (experimentally validated and in silico predicted) per species. Click the hyperlink of your species of interest to browse strains.

Alphabet: All A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Species	Number of strains	Number of Exp. NT genes	Number of Pred. NT genes
Vibrio cholerae	133	46	4565
Vibrio campbellii	23	16	713
Vibrio parahaemolyticus	122	12	3745
Vibrio breoganii	2	0	34
Vibrio aerogenes	1	0	14
Vibrio comitans	1	0	18
Vibrio inusitatus	1	0	17
Vibrio ishigakensis	1	0	18
Vescimonas coprocola	1	0	4
Vibrio gallicus	1	0	16
Veillonella orientalis	1	0	2
Vibrio ponticus	1	0	23
Vibrio panuliri	1	0	23
Vibrio gangliei	1	0	25
Veillonella nakazawae	1	0	2
Vibrio mangrovi	1	0	20
Vescimonas fastidiosa	1	0	3
Vibrio pectenicida	1	0	22
Vibrio artabrorum	1	0	28
Vibrio penaeicida	5	0	139
Vibrio celticus	1	0	27
Vibrio coralliirubri	1	0	28
Vibrio echinoideorum	1	0	29
Vibrio cortegadensis	1	0	30
Vibrio zhugei	2	0	34
Vibrio spartinae	2	0	40
Vibrio taketomensis	2	0	51
Vibrio palustris	1	0	19
Vibrio plantisponsor	1	0	29
Vibrio rarus	1	0	17
Vibrio rhizosphaerae	1	0	20
Vibrio neonatus	1	0	19
Vibrio casei	1	0	23
Variovorax sp. RA8	1	0	11
Variovorax sp. PBL-H6	1	0	10
Variovorax sp. SRS16	1	0	12
Variovorax sp. PBL-E5	1	0	13
Variovorax sp. WDL1	1	0	11
Variovorax sp. PBS-H4	1	0	11
Veillonella dispar	1	0	2
Vibrio sp. B1FIG11	1	0	29
Vibrio sp. MA40-2	1	0	17
Vagococcus salmoninarum	4	0	32
Variovorax sp. SCN45	1	0	9
Vibrio sp. B1ASS3	1	0	29
Vibrio sp. B1FLJ16	2	0	56
Vibrio paracholerae	1	0	30
Vaginimicrobium propionicum	1	0	1
Vibrio nigripulchritudo	5	0	146
Vibrio sp. EJY3	1	0	29
Verrucomicrobium spinosum	1	0	1
Variibacter gotjawalensis	1	0	2
Vibrio rumoiensis	1	0	22
Vibrio fortis	1	0	29
Vibrio antiquarius	1	0	32
Vibrio atlanticus	2	0	59
Vibrio tapetis	1	0	26
Veillonella rodentium	1	0	2
Varibaculum prostatecancerukia	1	0	1
Vibrio sp. 16	1	0	32
Verminephrobacter eiseniae	1	0	12
Vibrio aphrogenes	1	0	25
Vibrio tasmaniensis	1	0	30
Vibrio cincinnatiensis	4	0	114
Virgibacillus sp. Bac330	1	0	8
Vibrio cidicii	1	0	28
Vagococcus xieshaowenii	1	0	12
Vibrio sp. THAF190c	1	0	26
Vagococcus zengguangii	1	0	10
Virgibacillus sp. Bac332	1	0	6
Vibrio sp. dhg	1	0	29
Vreelandella alkaliphila	1	0	3
Vibrio qinghaiensis	1	0	31
Vibrio jasicida	1	0	33
Vibrio hyugaensis	1	0	30
Variovorax sp. PMC12	1	0	10
Vibrio aquimaris	1	0	21
Vibrio sp. THAF64	1	0	20
Vagococcus coleopterorum	1	0	8
Vibrio ziniensis	1	0	27
Vagococcus hydrophili	1	0	6
Vibrio sp. HDW18	1	0	27
Vallitalea pronyensis	1	0	2
Vallitalea guaymasensis	1	0	2
Virgibacillus sp. MSP4-1	1	0	6
Vibrio astriarenae	1	0	25
Vibrio algicola	1	0	25
Venatoribacter cucullus	2	0	28
Vibrio sp. THAF191d	1	0	20
Vibrio sp. THAF191c	1	0	20
Variovorax sp. RKNM96	1	0	12
Vitreoscilla filiformis	1	0	10
Vibrio tarriae	1	0	33
Variovorax sp. V116	1	0	10
Variovorax sp. V15	1	0	9
Variovorax sp. V118	1	0	8
Variovorax sp. V213	1	0	11
Variovorax sp. V59	1	0	11
Variovorax sp. V35	1	0	10
Variovorax sp. V11	1	0	11
Vibrio apostichopi	1	0	28
Vibrio toranzoniae	1	0	29
Vreelandella titanicae	4	0	22
Vulcanimicrobium alpinum	1	0	1
Vibrio sp. STUT-A11	1	0	29
Vibrio sp. STUT-A16	1	0	31
Variovorax sp. V93	1	0	11
Variovorax sp. V77	1	0	10
Virgibacillus dokdonensis	1	0	6
Vibrio mediterranei	2	0	47
Vagococcus penaei	1	0	6
Vitreoscilla sp. C1	1	0	14
Virgibacillus phasianinus	1	0	7
Veillonella atypica	1	0	2
Vibrio syngnathi	1	0	29
Virgibacillus sp. 6R	1	0	7
Vulgatibacter incomptus	1	0	5
Virgibacillus sp. SK37	1	0	7
Vibrio mimicus	5	0	161
Variovorax sp. PAMC 28711	1	0	9
Vagococcus teuberi	1	0	5
Vibrio gallaecicus	1	0	27
Variovorax sp. UC122_21	1	0	10
Vibrio ostreae	1	0	26
Virgibacillus salidurans	1	0	7
Vreelandella profundi	1	0	4
Vibrio harveyi	29	0	834
Vreelandella piezotolerans	2	0	8
Vibrio sp. ED002	1	0	30
Vibrio fluvialis	17	0	532
Virgibacillus pantothenticus	1	0	6
Vibrio sp. SCSIO 43153	1	0	30
Vibrio sp. SCSIO 43155	1	0	28
Vibrio sp. SCSIO 43145	1	0	23
Vibrio sp. SCSIO 43135	1	0	31
Vibrio sp. SCSIO 43186	1	0	23
Vagococcus fluvialis	5	0	49
Vagococcus lutrae	10	0	75
Vibrio anguillarum	15	0	474
Vibrio pomeroyi	2	0	57
Vitreoscilla massiliensis	1	0	15
Vitreoscilla stercoraria	1	0	14
Vibrio sp. JC009	1	0	19
Vibrio sp. DW001	1	0	21
Vibrio pelagius	2	0	53
Vibrio maritimus	1	0	24
Vreelandella aquamarina	6	0	44
Virgibacillus necropolis	2	0	14
Vogesella sp. XCS3	1	0	16
Vibrio sp. VB16	1	0	22
Virgibacillus halodenitrificans	4	0	28
Vibrio sp. SCSIO 43140	1	0	23
Vibrio sp. SCSIO 43136	1	0	27
Vibrio bathopelagicus	1	0	30
Variovorax sp. 38R	1	0	9
Variovorax paradoxus	16	0	156
Vibrio sp. SCSIO 43132	1	0	28
Vibrio splendidus	7	0	203
Viridibacillus arvi	1	0	8
Vibrio navarrensis	4	0	112
Vagococcus carniphilus	1	0	7
Variovorax sp. PAMC26660	1	0	8
Vibrio vulnificus	30	0	854
Variovorax sp. PAMC28562	1	0	10
Vibrio alginolyticus	48	0	1500
Vibrio sp. sp1	1	0	31
Vibrio crassostreae	2	0	59
Vibrio furnissii	12	0	368
Variovorax sp. PDNC026	1	0	10
Vibrio diabolicus	8	0	251
Vibrio sp. ABG19	1	0	26
Vibrio sp. SCSIO 43097	1	0	31
Vibrio sp. SCSIO 43139	1	0	23
Vibrio sp. SCSIO 43009	1	0	32
Vibrio sp. SCSIO 43133	1	0	24
Vibrio sp. ED004	1	0	28
Vreelandella venusta	5	0	27
Vibrio europaeus	3	0	93
Vibrio kanaloae	5	0	140
Vibrio cyclitrophicus	23	0	659
Veillonella parvula	8	0	16
Vibrio gigantis	2	0	57
Vibrio gazogenes	4	0	80
Variovorax sp. NFACC28	1	0	9
Variovorax sp. NFACC29	1	0	8
Variovorax sp. NFACC27	1	0	9
Variovorax sp. NFACC26	1	0	9
Variovorax sp. 375MFSha3.1	1	0	9
Variovorax sp. KK3	1	0	12
Vandammella animalimorsus	2	0	19
Vibrio tritonius	2	0	37
Vagococcus jeotgali	1	0	5
Vreelandella neptunia	1	0	6
Vibrio iocasae	1	0	18
Vibrio diazotrophicus	1	0	29
Vibrio chagasii	2	0	59
Variovorax sp. 350MFTsu5.1	1	0	10
Variovorax sp. 278MFTsu5.1	1	0	10
Vreelandella sp. F11	1	0	6
Vibrio sp. F13	1	0	28
Variovorax boronicumulans	2	0	17
Vaginella massiliensis	1	0	2
Variovorax sp. UC74_104	1	0	8
Vibrio sp. D3	1	0	32
Variovorax sp. Varisp41	1	0	9
Vibrio porteresiae	2	0	36
Vreelandella sp. SM1641	1	0	7
Variovorax sp. 160MFSha2.1	1	0	9
Vibrio sp. NTOU-M3	1	0	31
Vibrio sp. HB236076	1	0	14
Vibrio sp. BS-M-Sm-2	1	0	56
Vibrio alfacsensis	4	0	110
Variovorax sp. EBFNA2	1	0	9
Vibrio japonicus	1	0	28
Vibrio owensii	6	0	175
Vagococcus luciliae	1	0	5
Vibrio sp. J502	1	0	32
Vagococcus intermedius	2	0	18
Virgibacillus natechei	1	0	8
Virgibacillus sp. CBA3643	1	0	8
Vibrio sp. J383	1	0	29
Vibrio lentus	2	0	57
Vagococcus sp. CY52-2	1	0	4
Vibrio natriegens	9	0	316
Vibrio metschnikovii	5	0	155
Vibrio sinaloensis	1	0	25
Veillonella rogosae	2	0	4
Vibrio misgurnus	1	0	29
Vibrio aestuarianus	1	0	30
Vibrio sp. SNU_ST1	1	0	29
Vibrio scophthalmi	5	0	125
Vibrio ruber	2	0	41
Vibrio sp. NH-UV-68	1	0	24
Vibrio metoecus	5	0	160
Vibrio sp. YMD68	1	0	27
Vibrio sp. SCSIO 43137	1	0	23
Vibrio chaetopteri	1	0	24
Vibrio tubiashii	2	0	62
Varunaivibrio sulfuroxidans	1	0	2
Vibrio coralliilyticus	7	0	176
Vibrio rotiferianus	3	0	94

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Experimentally validated

Bioinformatically predicted