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This page lists the natural transformation-associated gene counts (experimentally validated and
in silico
predicted) per species. Click the hyperlink of your species of interest to browse strains.
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Y
Z
Species
Number of strains
Number of Exp. NT genes
Number of Pred. NT genes
Riemerella anatipestifer
51
22
237
Ralstonia pseudosolanacearum
40
4
510
Rhizobium sp. CC1099
1
0
2
Rhizobium sp. CB3171
1
0
2
Roseinatronobacter sp. S2
1
0
2
Rhizobium sp. 32-5/1
1
0
2
Rhodococcus sp. RCBS9
1
0
1
Rhizobium sp. CB3090
1
0
2
Roseibium porphyridii
1
0
2
Rugamonas sp. DEMB1
1
0
14
Rhodomicrobium lacus
1
0
2
Rothia sp. SD9660Na
1
0
1
Rhizobium sp. BT04
1
0
3
Rhizobium sp. BT03
1
0
2
Rhizobium croatiense
1
0
2
Rossellomorea sp. DA94
1
0
13
Rhodanobacter sp. AS-Z3
1
0
12
Rhizobium rhododendri
1
0
1
Roseburia hominis
3
0
9
Rhizobium tumorigenes
2
0
2
Rickettsia asembonensis
1
0
1
Roseibium sp. Sym1
1
0
2
Rhodopirellula sp. P2
1
0
2
Rhodococcus sp. DK180
1
0
1
Rhizobium binxianense
2
0
4
Rahnella bonaserana
1
0
4
Roseovarius tolerans
1
0
2
Rhodococcus sp. DK17
1
0
1
Rhodococcus sp. DK176
1
0
1
Ruminiclostridium papyrosolvens
1
0
3
Rhodococcus sp. M8-33
1
0
1
Raineyella sp. LH-20
1
0
1
Raineyella sp. W15-4
1
0
1
Rubellicoccus peritrichatus
1
0
1
Rhodococcoides kroppenstedtii
1
0
1
Roseburia sp. 499
1
0
3
Rhodoferax ferrireducens
2
0
22
Robbsia andropogonis
1
0
3
Rhizobium johnstonii
5
0
10
Roseovarius sp. Pro17
1
0
2
Rhizobium beringeri
3
0
6
Rhizobium indigoferae
1
0
3
Roseivirga spongicola
1
0
3
Roseburia sp. 831b
1
0
4
Rheinheimera sp. MMS21-TC3
1
0
10
Rhodococcus sp. M8-35
1
0
1
Rummeliibacillus pycnus
1
0
11
Rhodococcus sp. M8-20
1
0
1
Rhizobium sp. SSA_523
1
0
3
Rouxiella chamberiensis
1
0
3
Rhodoferax mekongensis
1
0
11
Rhodococcus sp. D-6
1
0
1
Rhodococcus sp. DN22
1
0
1
Rhodococcus sp. SG20037
1
0
1
Rhodoligotrophos ferricapiens
1
0
2
Rhodopseudomonas sp. BAL398
1
0
2
Rathayibacter soli
1
0
1
Rhodococcus sp. M8-50
1
0
1
Rickettsia tamurae
1
0
1
Rhizobium sp. SU303
1
0
3
Rhodanobacter denitrificans
8
0
106
Rhizobium laguerreae
1
0
2
Radiobacillus kanasensis
1
0
8
Ruania suaedae
1
0
1
Rhodanobacter thiooxydans
2
0
28
Rahnella victoriana
1
0
4
Roseburia rectibacter
1
0
3
Raoultella sp. HC6
1
0
5
Rhizobium sp. K102
1
0
1
Rhizobium sp. C104
1
0
2
Roseivivax marinus
1
0
2
Ruania halotolerans
1
0
1
Rhizobium sp. T136
1
0
3
Rickettsiella endosymbiont of Dermanyssus gallinae
1
0
4
Rhodococcus sp. LW-XY12
1
0
1
Rhodococcus sp. C1
1
0
1
Rhodospirillum rubrum
3
0
6
Rhizobium sp. WYJ-E13
1
0
1
Rhodococcus globerulus
2
0
2
Roseovarius sp. SCSIO 43702
1
0
2
Ruminococcus sp. FMB-CY1
1
0
2
Roseomonas cutis
1
0
2
Ruegeria sp. B32
1
0
2
Ruegeria conchae
2
0
4
Ruficoccus sp. ZRK36
1
0
1
Rossellomorea sp. KS-H15a
1
0
13
Rhodococcus sp. GA1
1
0
1
Reichenbachiella carrageenanivorans
1
0
3
Roseovarius pelagicus
1
0
2
Reichenbachiella agarivorans
1
0
2
Roseateles amylovorans
1
0
10
Rhizobium sp. CB3060
1
0
2
Rhodococcus sacchari
1
0
1
Rhodococcus sp. NBC_00297
1
0
1
Raoultella sp. DY2415
1
0
5
Rhodococcus sp. PD04
1
0
1
Rhodococcus antarcticus
1
0
1
Rhodopseudomonas sp. P2A-2r
1
0
3
Rhodococcus sp. NBC_00294
1
0
1
Rhizobium sophoriradicis
1
0
2
Rhizobium sullae
1
0
2
Rhizobium sp. Pop5
1
0
2
Rhodococcus gordoniae
1
0
1
Rhizobium anhuiense
1
0
2
Rickettsia conorii
8
0
15
Rummeliibacillus sp. G93
1
0
10
Roseburia intestinalis
2
0
6
Ruminococcus gauvreauii
2
0
8
Rhizobium sp. WSM4643
1
0
2
Rhizobium sp. WSM1274
1
0
2
Rhizobium sp. SRDI969
1
0
2
Riemerella columbina
1
0
3
Ruegeria sp. YS9
1
0
2
Rhodococcus sp. JS3073
1
0
1
Roseobacter fucihabitans
1
0
2
Roseovarius sp.
1
0
2
Robiginitalea biformata
2
0
4
Roseivirga sp.
1
0
3
Rubrivirga sp.
1
0
3
Roseibium sp.
4
0
9
Rickettsia endosymbiont of Nabis limbatus
1
0
2
Rhodopirellula baltica
1
0
2
Ruegeria sp. TM1040
1
0
4
Roseiflexus castenholzii
1
0
2
Rickettsia canadensis
2
0
2
Roseiflexus sp. RS-1
1
0
2
Rhodococcus jostii
1
0
1
Rubrobacter xylanophilus
2
0
8
Roseibium alexandrii
2
0
4
Rickettsia endosymbiont of Pantilius tunicatus
1
0
2
Rickettsia endosymbiont of Rhinocyllus conicus
1
0
1
Rickettsia endosymbiont of Ceutorhynchus obstrictus
1
0
1
Rickettsia endosymbiont of Lasioglossum villosulum
1
0
1
Rickettsia endosymbiont of Cantharis rufa
1
0
1
Rickettsia endosymbiont of Gonocerus acuteangulatus
1
0
1
Rickettsia endosymbiont of Aspidapion aeneum
1
0
1
Rickettsia endosymbiont of Seladonia tumulorum
1
0
1
Rickettsiella endosymbiont of Litargus connexus
1
0
3
Rhabdochlamydiaceae symbiont of Dictyostelium giganteum
1
0
2
Rickettsiella endosymbiont of Miltochrista miniata
1
0
3
Rickettsiella endosymbiont of Rhagonycha lignosa
1
0
2
Rickettsiella endosymbiont of Aleochara curtula
1
0
2
Rickettsia akari
1
0
2
Rickettsia massiliae
1
0
2
Rhodoferax lithotrophicus
1
0
10
Rhodococcus sp. RDE2
1
0
1
Rickettsia asiatica
1
0
1
Rhizobium tropici
1
0
2
Rivularia sp. PCC 7116
1
0
5
Raoultibacter timonensis
2
0
2
Roseomonas fluvialis
1
0
1
Roseicyclus elongatus
1
0
2
Rhodoplanes sp. Z2-YC6860
1
0
2
Rodentibacter abscessus
3
0
57
Roseicyclus marinus
1
0
2
Rhodoluna sp. KAS3
1
0
1
Rickettsia australis
1
0
1
Rickettsia montanensis
1
0
2
Rickettsia africae
1
0
1
Rickettsia peacockii
1
0
1
Ruminiclostridium cellulolyticum
1
0
2
Rippkaea orientalis
1
0
11
Rhodospirillum centenum
1
0
2
Rhodothermus marinus
4
0
8
Rhodomicrobium vannielii
1
0
2
Roseobacter litoralis
1
0
2
Rickettsia philipii
1
0
1
Runella slithyformis
1
0
3
Rubinisphaera brasiliensis
1
0
1
Ruminococcus albus
1
0
2
Rickettsia endosymbiont of Polydrusus tereticollis
1
0
1
Rickettsiella endosymbiont of Xylota segnis
1
0
3
Ruicaihuangia caeni
1
0
1
Ralstonia sp. CP
1
0
15
Rhodophyticola porphyridii
1
0
2
Rhizobium sp. ZPR4
1
0
2
Rhizobium sp. ZPR3
1
0
2
Rhodoferax sp. WC2427
1
0
14
Ruminococcus sp. JE7B6
1
0
2
Rhodococcus sp. NyZ502
1
0
1
Ralstonia sp. Ralssp110
1
0
14
Rhodococcus sp. JVH1
1
0
1
Rouxiella sp. WC2420
1
0
4
Ruminococcus sp. JL13D9
1
0
2
Rhodanobacter sp. IGA1.0
1
0
12
Rickettsia oklahomensis
1
0
1
Ralstonia sp. RRA
1
0
11
Roseovarius rhodophyticola
1
0
2
Roseovarius phycicola
1
0
2
Rossellomorea sp. y25
1
0
16
Ruoffia tabacinasalis
1
0
6
Rhodococcus sovatensis
1
0
1
Rhizobium sp. T1470
1
0
2
Rhodoferax sp. GW822-FHT02A01
1
0
11
Robbsia sp. KACC 23696
1
0
4
Roseibacillus persicicus
1
0
1
Rhodococcus wratislaviensis
1
0
1
Rhizobium sp. T1473
1
0
2
Rossellomorea sp. FM04394
1
0
15
Roseomonas sp. CCTCC AB2023176
1
0
1
Ruminococcus bicirculans (ex Wegman et al. 2014)
1
0
5
Rickettsia monacensis
1
0
1
Roseateles sp. So40a
1
0
12
Rubrivivax gelatinosus
4
0
47
Rhodococcus indonesiensis
1
0
1
Ruthenibacterium lactatiformans
1
0
2
Rhodococcus coprophilus
1
0
1
Rheinheimera sp. MM224
1
0
9
Rickettsia helvetica
2
0
2
Rhodovastum atsumiense
1
0
2
Rickettsia endosymbiont of Oedothorax gibbosus
1
0
1
Rickettsia typhi
4
0
4
Rhizobium sp. ZK1
1
0
2
Roseicyclus sp.
1
0
2
Rhodanobacter sp. FW102-FHT14D06
1
0
14
Rickettsia sp. 2024-CO-Wats
1
0
3
Rhodanobacter sp. FW102-FHT14D07
1
0
14
Rickettsia sibirica
10
0
28
Roseateles sp. UC29_93
1
0
8
Roseburia faecis
1
0
4
Rhizobium sp. SYY.PMSO
1
0
2
Rhodovulum sp. HP10
1
0
2
Rhizobium cremeum
1
0
2
Rhizobium sp. WW22
1
0
3
Rubrivirga sp. IMCC45206
1
0
3
Rubrivirga sp. IMCC43871
1
0
3
Ruegeria pomeroyi
2
0
4
Rhodococcus sp. USK10
1
0
1
Rhizobium sp. NXC24
1
0
2
Roseomonas sp. FDAARGOS_362
1
0
2
Rhodococcus sp. H-CA8f
1
0
1
Rhodobacter sp. CZR27
1
0
2
Rhizorhabdus dicambivorans
1
0
1
Rothia mucilaginosa
9
0
9
Roseinatronobacter bogoriensis
1
0
2
Roseomonas mucosa
9
0
18
Rhodococcus rhodochrous
5
0
5
Rathayibacter rathayi
1
0
1
Roseobacter denitrificans
2
0
4
Raoultella planticola
21
0
84
Rhodococcus qingshengii
16
0
16
Rhizobium sp. 11515TR
1
0
1
Rhodococcus pyridinivorans
16
0
16
Rhodopseudomonas palustris
17
0
35
Rhodovulum sp. MB263
1
0
4
Rhizobium rhizogenes
5
0
9
Roseibium algicola
1
0
2
Rhodococcus sp. MTM3W5.2
1
0
1
Roseovarius mucosus
2
0
4
Rhizobium sp. CIAT894
1
0
2
Rhizobium sp. Kim5
1
0
2
Rhodococcus oxybenzonivorans
1
0
1
Richelia sinica
1
0
5
Rhizobium sp. NXC14
1
0
2
Rhizobium sp. TAL182
1
0
2
Rathayibacter iranicus
1
0
1
Rathayibacter festucae
2
0
2
Roseovarius faecimaris
1
0
2
Rheinheimera mangrovi
1
0
9
Rhodococcus sp. NJ-530
1
0
1
Rickettsiales endosymbiont of Stachyamoeba lipophora
1
0
3
Rhodococcus sp. P1Y
1
0
1
Rhodococcus sp. X156
1
0
1
Rhizobium acidisoli
1
0
2
Rhodoferax aquaticus
1
0
11
Rohdeia mirabilis
1
0
3
Roseimaritima multifibrata
1
0
2
Rhodoferax sediminis
1
0
12
Rhodococcus sp. ABRD24
1
0
1
Rhizobium jaguaris
1
0
2
Rhizobium sp. CCGE532
1
0
2
Raoultella sp. X13
1
0
5
Runella sp. SP2
1
0
3
Runella rosea
1
0
3
Roseovarius sp. TM1035
1
0
2
Renibacterium salmoninarum
3
0
3
Rubrobacter indicoceani
1
0
3
Rhizobium sp. ZX09
1
0
1
Rhizobium rosettiformans
1
0
2
Rhizobium sp. CCGE531
1
0
2
Rickettsia japonica
14
0
28
Ruegeria sp. AD91A
1
0
2
Roseovarius indicus
2
0
4
Rhodoferax antarcticus
1
0
9
Rhodoferax saidenbachensis
1
0
11
Ralstonia solanacearum
32
0
421
Rhodococcus sp. 008
1
0
1
Rufibacter tibetensis
1
0
3
Ralstonia insidiosa
2
0
24
Rickettsia amblyommatis
3
0
3
Rickettsia rhipicephali
2
0
2
Rhizobium sp. N6212
1
0
2
Rhizobium sp. N1314
1
0
2
Rhizobium sp. N113
1
0
2
Rhizobium sp. N1341
1
0
2
Rhizobium esperanzae
1
0
2
Rhizobium sp. N621
1
0
2
Reinekea forsetii
1
0
12
Rhodococcus aetherivorans
8
0
8
Rhodococcus opacus
10
0
10
Rugosibacter aromaticivorans
1
0
12
Raoultella ornithinolytica
50
0
249
Rubrobacter radiotolerans
1
0
2
Rhodoluna lacicola
2
0
2
Rufibacter sp. DG15C
1
0
3
Rufibacter radiotolerans
1
0
3
Ramlibacter tataouinensis
3
0
36
Rhodococcus erythropolis
12
0
12
Rathayibacter toxicus
4
0
4
Ralstonia mannitolilytica
3
0
39
Rhodococcus sp. B7740
1
0
1
Rhizobium phaseoli
15
0
30
Rhizobium sp. N871
1
0
2
Rhodococcus sp. WMMA185
1
0
1
Rhizobium gallicum
3
0
6
Rhodococcus sp. p52
1
0
1
Rhizobium leguminosarum
23
0
48
Roseomonas gilardii
2
0
2
Rhizobium etli
5
0
12
Rhodococcus sp. YL-1
1
0
2
Rahnella sikkimica
1
0
4
Rhodoferax koreensis
1
0
10
Rickettsia rickettsii
25
0
26
Rhodococcus sp. 2G
1
0
1
Rhodobacter xanthinilyticus
1
0
2
Rhodococcus sp. WB1
1
0
1
Rathayibacter tritici
1
0
1
Roseateles depolymerans
1
0
9
Rummeliibacillus stabekisii
1
0
10
Rhizobium sp. N324
1
0
2
Rhizobium sp. N731
1
0
2
Rhizobium sp. N741
1
0
2
Rickettsia prowazekii
10
0
10
Rhodococcus sp. BH4
1
0
1
Rhodococcoides fascians
5
0
5
Rhodovulum sulfidophilum
2
0
7
Rhodococcus sp. PBTS 1
1
0
1
Rhodovulum sp. P5
1
0
2
Rickettsia bellii
3
0
3
Rosistilla oblonga
1
0
2
Rubripirellula lacrimiformis
1
0
2
Ruminiclostridium herbifermentans
1
0
4
Roseicitreum antarcticum
1
0
2
Rhodobacter capsulatus
3
0
6
Roseomonas haemaphysalidis
1
0
2
Roseomonas marmotae
1
0
3
Rothia amarae
1
0
1
Rothia terrae
1
0
1
Ruania alkalisoli
1
0
1
Rhizobium sp. SL42
1
0
3
Rodentibacter haemolyticus
1
0
20
Rhizobium sp. TH2
1
0
2
Roseococcus microcysteis
1
0
2
Rouxiella badensis
2
0
8
Rickettsia tillamookensis
1
0
1
Rothia dentocariosa
7
0
7
Rhizobium indicum
2
0
4
Rhizobium brockwellii
1
0
2
Romboutsia sp. CE17
1
0
4
Rhodococcus sp. DMU1
1
0
1
Rhizobium hidalgonense
1
0
2
Rhodoferax sp. BAB1
1
0
12
Rhodoferax sp. AJA081-3
1
0
10
Rhizorhabdus wittichii
1
0
1
Rhodococcus sp. ZPP
1
0
1
Rothia nasimurium
1
0
1
Rhodococcus sp. W8901
1
0
1
Rhodococcus sp. M8
1
0
1
Rhizobium sp. 007
1
0
2
Rhizobium ruizarguesonis
5
0
10
Rhizobium sp. L51/94
1
0
2
Rhizobium sp. NZLR1
1
0
2
Rhizobium bangladeshense
2
0
4
Rhizobium binae
1
0
2
Rhizobium sp. K1/93
1
0
1
Rhizobium sp. K15/93
1
0
1
Rhizobium sp. NLR16a
1
0
2
Ruminococcus sp. FMBCY1
1
0
2
Rhodoferax sp. PAMC 29310
1
0
10
Rhizobium sp. B21/90
1
0
1
Rhizobium sp. B230/85
1
0
1
Rhizobium lentis
1
0
2
Rhizobium sp. X9
1
0
1
Rahnella aceris
3
0
9
Raoultella sp. XY-1
1
0
5
Ralstonia pickettii
2
0
24
Rothia kristinae
3
0
3
Ruegeria sp. SCSIO 43209
1
0
2
Rhizobium sp. AB2/73
1
0
6
Rothia aeria
3
0
3
Rhodococcus koreensis
1
0
1
Rhodococcus pseudokoreensis
1
0
1
Rothia sp. ZJ932
1
0
1
Rhodanobacter sp. FDAARGOS 1247
1
0
12
Rhodococcus sp. USK13
1
0
1
Raoultella terrigena
5
0
26
Rhizobium lusitanum
1
0
2
Rhizobium grahamii
1
0
2
Rhizobium sp. BG6
1
0
2
Roseimaritima ulvae
1
0
2
Ruania zhangjianzhongii
1
0
1
Rhizobium sp. WL3
1
0
2
Rhizosphaericola mali
1
0
2
Rhizobium sp. BG4
1
0
1
Roseivivax sp. THAF197b
1
0
2
Roseivivax sp. THAF40
1
0
2
Rubrobacter marinus
1
0
3
Rubrobacter tropicus
1
0
3
Rhodococcus ruber
1
0
1
Rhodanobacter glycinis
1
0
15
Rhodococcus sp. WB9
1
0
1
Rhodophyticola sp. CCM32
1
0
2
Rhodococcus sp. PAMC28707
1
0
1
Rheinheimera sp. D18
1
0
8
Rhodopseudomonas boonkerdii
1
0
2
Roseitalea porphyridii
2
0
4
Rhodococcus sp. PAMC28705
1
0
1
Ruminococcus bovis
1
0
2
Rodentibacter caecimuris
1
0
19
Radiobacillus deserti
1
0
7
Rhodoluna limnophila
3
0
3
Rickettsia parkeri
2
0
2
Rhodococcus sp. SGAir0479
1
0
1
Ruegeria sp. THAF33
1
0
2
Roseivivax sp. THAF30
1
0
2
Rhizobium daejeonense
1
0
2
Rhizobium oryzihabitans
1
0
1
Rhodocytophaga rosea
1
0
2
Rossellomorea vietnamensis
2
0
28
Rathayibacter tanaceti
1
0
1
Roseobacter ponti
1
0
2
Rhodococcus triatomae
2
0
2
Rhizobium rhizoryzae
1
0
1
Roseateles sp. DAIF2
1
0
9
Roseimicrobium sp. ORNL1
1
0
1
Rhizorhabdus phycosphaerae
1
0
1
Rasiella rasia
1
0
2
Rathayibacter sp. VKM Ac-2805
1
0
2
Rathayibacter sp. VKM Ac-2801
1
0
1
Roseibium aggregatum
6
0
12
Raineyella fluvialis
1
0
1
Roseovarius sp. THAF8
1
0
2
Roseovarius sp. THAF9
1
0
2
Roseovarius sp. THAF27
1
0
2
Rhodococcus sp. AQ5-07
1
0
1
Rhodococcus sp. WAY2
1
0
1
Rathayibacter sp. VKM Ac-2760
1
0
1
Rathayibacter sp. VKM Ac-2759
1
0
1
Rossellomorea marisflavi
5
0
71
Ralstonia syzygii
10
0
117
Ralstonia nicotianae
1
0
13
Ralstonia wenshanensis
1
0
10
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Experimentally validated
Bioinformatically predicted