Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2651006..2651331 Replicon chromosome
Accession NZ_CP008698
Organism Bacillus subtilis subsp. subtilis str. AG1839

Toxin (Protein)


Gene name txpA Uniprot ID P54373
Locus tag BSUB_RS14120 Protein ID WP_004398662.1
Coordinates 2651006..2651185 (+) Length 60 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2651109..2651331 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BSUB_RS14110 2650232..2650369 - 138 WP_003229934.1 hypothetical protein -
BSUB_RS14115 2650411..2650860 - 450 WP_003229933.1 phage portal protein -
BSUB_RS14120 2651006..2651185 + 180 WP_004398662.1 type I toxin-antitoxin system toxin TxpA Toxin
- 2651109..2651331 - 223 NuclAT_0 - Antitoxin
- 2651109..2651331 - 223 NuclAT_0 - Antitoxin
- 2651109..2651331 - 223 NuclAT_0 - Antitoxin
- 2651109..2651331 - 223 NuclAT_0 - Antitoxin
BSUB_RS22870 2651565..2651654 + 90 WP_075058862.1 type I toxin-antitoxin system toxin BsrH -
BSUB_RS14125 2651908..2652351 - 444 WP_003229930.1 phage tail tube protein -
BSUB_RS14130 2652354..2653754 - 1401 WP_003229929.1 phage tail sheath family protein -
BSUB_RS14135 2653755..2653946 - 192 WP_010886574.1 hypothetical protein -
BSUB_RS14140 2653943..2654380 - 438 WP_003229927.1 hypothetical protein -
BSUB_RS14145 2654393..2654896 - 504 WP_003246050.1 HK97 gp10 family phage protein -
BSUB_RS14150 2654893..2655255 - 363 WP_003229925.1 YqbH/XkdH family protein -
BSUB_RS14155 2655252..2655647 - 396 WP_004398566.1 DUF3199 family protein -
BSUB_RS14160 2655651..2655962 - 312 WP_003229923.1 YqbF domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Prophage - - 2625759..2675870 50111


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 60 a.a.        Molecular weight: 6739.19 Da        Isoelectric Point: 8.0370

>T47271 WP_004398662.1 NZ_CP008698:2651006-2651185 [Bacillus subtilis subsp. subtilis str. AG1839]
MSTYESLMVMIGFANLIGGIMTWVISLLTLLFMLRKKDTHPIYITVKEKCLHEDPPIKG

Download         Length: 180 bp

>T47271 NZ_CP008698:2651006-2651185 [Bacillus subtilis subsp. subtilis str. AG1839]
ATGTCGACCTATGAATCTCTAATGGTCATGATCGGCTTTGCCAATTTAATAGGCGGGATTATGACATGGGTAATATCTCT
TTTAACATTATTATTCATGCTTAGAAAAAAAGACACTCATCCTATTTACATTACTGTAAAGGAAAAGTGTCTACACGAGG
ACCCTCCTATTAAAGGGTAG

Antitoxin


Download         Length: 223 bp

>AT47271 NZ_CP008698:c2651331-2651109 [Bacillus subtilis subsp. subtilis str. AG1839]
CAAGCAAAAGTATTGCAACTACTGGCGTAAGCTTATAGTTGGTACCACATTACCACATTACCACTTGTTAATGTGTGTTA
CTTTCATGAGAAATGCTAAAATATAAAAGCCAGAGTGTGGCAGCACTCTAGCTTTTAAAAAAGAAACTACCCTTTAATAG
GAGGGTCCTCGTGTAGACACTTTTCCTTTACAGTAATGTAAATAGGATGAGTGTCTTTTTTTC

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A164X333

Antitoxin

Download structure file

References