TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Orphan Toxin (Protein)


Predicted family - (T176) Predicted domain PRK09831
Locus tag orf3535 Length 124 a.a.
Coordinates 3752827..3753201 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf3526 3748598..3749056 - 459 ORF3526 Predicted ORF by PRODIGAL Version 1.20 -
orf3527 3749317..3750774 + 1458 ORF3527 Predicted ORF by PRODIGAL Version 1.20 -
orf3528 3750831..3751445 - 615 ORF3528 Predicted ORF by PRODIGAL Version 1.20 -
orf3529 3751442..3752581 - 1140 ORF3529 Predicted ORF by PRODIGAL Version 1.20 -
orf3530 3752827..3753201 - 375 ORF3530 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf3531 3753276..3754331 - 1056 ORF3531 Predicted ORF by PRODIGAL Version 1.20 -
orf3532 3754402..3755325 - 924 ORF3532 Predicted ORF by PRODIGAL Version 1.20 -
orf3533 3755328..3756191 - 864 ORF3533 Predicted ORF by PRODIGAL Version 1.20 -
orf3534 3756204..3756920 - 717 ORF3534 Predicted ORF by PRODIGAL Version 1.20 -
orf3535 3756940..3757407 - 468 ORF3535 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin

PRK09831 (E-value: 7.9e-77, Score:254.4)

(27-150)

PRK10514 (E-value: 5.6e-11, Score:40.4)

(46-145)

PF00583 (GNAT) (E-value: 3.2e-06, Score:24.7)

(57-125)

PRK10562 (E-value: 0.00021, Score:19.3)

(62-132)

PF13508 (Acetyltransf_7) (E-value: 0.0012, Score:15.8)

(66-115)

COG1246 (ArgA) (E-value: 0.0019, Score:15.1)

(358-413)

PRK07922 (E-value: 0.004, Score:14.9)

(75-134)


Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 14552.69 Da        Isoelectric Point: 9.9394

>ORF3530 Orphan_TA_85 Toxin
MTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFISRIERHIDMLFVDPE
YTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGEWFINFYMRY
KQQH

Download         Length: 375 bp

>ORF3530 Orphan_TA_85 Toxin
TTAATGTTGCTGTTTATAACGCATATAAAAATTAATAAACCACTCTCCCCGACATTCAAC
GCGTTGCTGCTTAACTGTCTGAAAACCATAACGTTCAAAAAAGGGTTTTGCGGTTATGCT
TGCGTCCACCGTAAGTTCGGATTCAGACTTAATCAAAGGTTTTAACAAGGCGCTGGCAAC
CCCGCGGCGGGTGTATTCAGGGTCAACAAATAACATATCGATATGACGTTCAATGCGGGA
AATAAAACCAACCGGTTGTGCATTAATGACTGCAACCCGCACTTGTGATTTCGCGAGTTT
CTCCTTCCAGCGAGATTCGTCAATCTGCGCCCAGGCGGCAATTTGTTGTGGTGAATAATG
CTGACTGGCAGTCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T176 Vibrio cholerae O1 biovar El Tor str. N16961

39.394

40

0.21
T165 Vibrio cholerae O1 biovar El Tor str. N16961

39.394

40

0.21