TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | I | ||
Orphan Toxin (Protein)
| Predicted family | CD2517.1 (T10171) | Predicted domain | smart00422 (HTH_MERR) |
| Locus tag | orf2655 | Length | 243 a.a. |
| Coordinates | 2794145..2794876 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2646 | 2789353..2790876 | - | 1524 | ORF2646 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2647 | 2791208..2791456 | - | 249 | ORF2647 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2648 | 2791569..2791835 | - | 267 | ORF2648 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2649 | 2792179..2792415 | - | 237 | ORF2649 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2650 | 2792729..2793940 | + | 1212 | ORF2650 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2651 | 2794145..2794876 | + | 732 | ORF2651 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf2652 | 2795097..2795501 | + | 405 | ORF2652 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2653 | 2796623..2797873 | - | 1251 | ORF2653 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2654 | 2798045..2798698 | + | 654 | ORF2654 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2655 | 2798708..2799169 | + | 462 | ORF2655 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 28232.46 Da Isoelectric Point: 8.0851
>ORF2651 Orphan_TA_60 Toxin
VAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNG
VPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHV
YLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWL
EAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIF
HAP
VAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNG
VPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHV
YLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWL
EAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIF
HAP
Download Length: 732 bp
>ORF2651 Orphan_TA_60 Toxin
GTGGCTTATTACAGCATTGGTGATGTTGCTGAACGTTGCGGGATTAATCCTGTCACTCTC
CGGGCCTGGCAACGCCGCTACGGTTTGTTAAAACCACAGCGCAGTGAAGGCGGACACCGA
CTCTTTGATGAAGAAGACATACAACGCATCGAAGAGATCAAGCGTTGGATAAGTAATGGC
GTCCCTGTAGGCAAAGTTAAAGCATTACTGGAAACCACCAGCCAGGATACGGAAGATGAC
TGGAGCCGCCTGCAAGAAGAGATGATGTCAATTCTTCGCATGGCTAATCCTGCCAAACTA
CGCGCGAGAATTATTTCACTGGGTCGAGAGTACCCAGTAGATCAATTGATTAATCATGTT
TACCTTCCTGTTCGCCAGCGTCTCGTGCTTGATCACAACACCTCCCGCATTATGAGCAGT
ATGTTTGACGGCGCATTAATTGAATACGCAGCAACCTCGCTTTTCGAAATGCGCCGTAAG
CCCGGTAAAGAAGCCATTCTGATGGCGTGGAATGTTGAAGAGAGAGCACGATTGTGGCTG
GAAGCATGGCGTTTATCATTGTCAGGATGGCACATTTCTGTTCTTGCTGATCCCATTGAA
TCGCCGCGCCCGGAACTGTTCCCGACGCAAACATTGATTGTCTGGACAGGCATGGCACCA
ACGAGAAGGCAAAACGAACTTTTACAACACTGGGGTGAGCAAGGTTATAAAGTCATCTTT
CATGCCCCCTAA
GTGGCTTATTACAGCATTGGTGATGTTGCTGAACGTTGCGGGATTAATCCTGTCACTCTC
CGGGCCTGGCAACGCCGCTACGGTTTGTTAAAACCACAGCGCAGTGAAGGCGGACACCGA
CTCTTTGATGAAGAAGACATACAACGCATCGAAGAGATCAAGCGTTGGATAAGTAATGGC
GTCCCTGTAGGCAAAGTTAAAGCATTACTGGAAACCACCAGCCAGGATACGGAAGATGAC
TGGAGCCGCCTGCAAGAAGAGATGATGTCAATTCTTCGCATGGCTAATCCTGCCAAACTA
CGCGCGAGAATTATTTCACTGGGTCGAGAGTACCCAGTAGATCAATTGATTAATCATGTT
TACCTTCCTGTTCGCCAGCGTCTCGTGCTTGATCACAACACCTCCCGCATTATGAGCAGT
ATGTTTGACGGCGCATTAATTGAATACGCAGCAACCTCGCTTTTCGAAATGCGCCGTAAG
CCCGGTAAAGAAGCCATTCTGATGGCGTGGAATGTTGAAGAGAGAGCACGATTGTGGCTG
GAAGCATGGCGTTTATCATTGTCAGGATGGCACATTTCTGTTCTTGCTGATCCCATTGAA
TCGCCGCGCCCGGAACTGTTCCCGACGCAAACATTGATTGTCTGGACAGGCATGGCACCA
ACGAGAAGGCAAAACGAACTTTTACAACACTGGGGTGAGCAAGGTTATAAAGTCATCTTT
CATGCCCCCTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10171 | Clostridium difficile 630 |
32.653 |
94.231 |
0.066 |