TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | hicB (AT10132) | Predicted domain | PF12441 (CopG) |
| Locus tag | orf261 | Length | 119 a.a. |
| Coordinates | 286451..286810 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf254 | 282261..284996 | + | 2736 | ORF254 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf255 | 284996..286120 | + | 1125 | ORF255 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf256 | 286451..286810 | + | 360 | ORF256 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf257 | 286930..287331 | - | 402 | ORF257 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf258 | 287337..288143 | - | 807 | ORF258 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf259 | 288140..288904 | - | 765 | ORF259 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf260 | 288904..289737 | - | 834 | ORF260 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf261 | 289734..290678 | - | 945 | ORF261 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 13402.27 Da Isoelectric Point: 5.1987
>ORF256 Orphan_TA_5 Antitoxin
MIKLKTPNSMEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSDSIQGLQKEGELSLREY
LEDCKAAGIEPYARTEKIKTFTLRYPESLSERLNNAAAQQQVSVNTYIIETLNERLNHL
MIKLKTPNSMEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSDSIQGLQKEGELSLREY
LEDCKAAGIEPYARTEKIKTFTLRYPESLSERLNNAAAQQQVSVNTYIIETLNERLNHL
Download Length: 360 bp
>ORF256 Orphan_TA_5 Antitoxin
ATGATCAAACTGAAGACGCCAAACTCTATGGAGATTGCCGGGCAACCTGCTGTTATCACT
TACGTGCCAGAACTGAATGCATTTCGTGGCAAATTCCTGGGCTTGTCAGGTTATTGTGAT
TTTGTCTCTGACAGCATTCAGGGGCTGCAAAAAGAAGGGGAACTTTCCCTGCGAGAGTAT
CTTGAGGATTGTAAAGCTGCGGGTATTGAGCCGTATGCGCGTACAGAAAAGATTAAGACC
TTTACGTTACGCTATCCAGAATCGCTGAGTGAACGCCTTAATAATGCGGCTGCGCAGCAA
CAAGTCTCTGTTAATACCTATATTATTGAAACACTGAATGAGCGTTTGAATCATTTATAA
ATGATCAAACTGAAGACGCCAAACTCTATGGAGATTGCCGGGCAACCTGCTGTTATCACT
TACGTGCCAGAACTGAATGCATTTCGTGGCAAATTCCTGGGCTTGTCAGGTTATTGTGAT
TTTGTCTCTGACAGCATTCAGGGGCTGCAAAAAGAAGGGGAACTTTCCCTGCGAGAGTAT
CTTGAGGATTGTAAAGCTGCGGGTATTGAGCCGTATGCGCGTACAGAAAAGATTAAGACC
TTTACGTTACGCTATCCAGAATCGCTGAGTGAACGCCTTAATAATGCGGCTGCGCAGCAA
CAAGTCTCTGTTAATACCTATATTATTGAAACACTGAATGAGCGTTTGAATCATTTATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10132 | Acetobacter pasteurianus strain Ab3 |
44.762 |
95.455 |
0.395 |
| AT10150 | Escherichia coli strain JIE143 transconjugant Tx143 |
25 |
83.478 |
0.202 |