TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | relB (AT727) | Predicted domain | - |
| Locus tag | orf2184 | Length | 42 a.a. |
| Coordinates | 2304099..2304227 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2169 | 2300013..2300249 | - | 237 | ORF2169 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2170 | 2300337..2302814 | - | 2478 | ORF2170 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2171 | 2302907..2303098 | - | 192 | ORF2171 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2172 | 2303095..2303283 | - | 189 | ORF2172 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2173 | 2303683..2303847 | + | 165 | ORF2173 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2174 | 2303851..2304069 | - | 219 | ORF2174 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2175 | 2304099..2304227 | - | 129 | ORF2175 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2176 | 2304229..2304384 | - | 156 | ORF2176 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2177 | 2304551..2304958 | - | 408 | ORF2177 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2178 | 2305042..2305272 | + | 231 | ORF2178 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2179 | 2305256..2305777 | + | 522 | ORF2179 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2180 | 2305758..2306723 | + | 966 | ORF2180 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2181 | 2306764..2307186 | + | 423 | ORF2181 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2182 | 2307183..2307539 | + | 357 | ORF2182 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2183 | 2308692..2308871 | + | 180 | ORF2183 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2184 | 2308846..2309028 | - | 183 | ORF2184 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 4688.08 Da Isoelectric Point: 3.7704
>ORF2175 Orphan_TA_44 Antitoxin
MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
Download Length: 129 bp
>ORF2175 Orphan_TA_44 Antitoxin
TCAGCCGTTAGATTTTGCCGAACTGGAAAGCGCCTGTTTAAACTCACTGAAGCTGAGAGC
TTCTTCGCCTTCGGCAAGGCCTTCGAAGTATTCTTCGTAAGCCTTTTCCATGATTGTGTC
GAAATCCAT
TCAGCCGTTAGATTTTGCCGAACTGGAAAGCGCCTGTTTAAACTCACTGAAGCTGAGAGC
TTCTTCGCCTTCGGCAAGGCCTTCGAAGTATTCTTCGTAAGCCTTTTCCATGATTGTGTC
GAAATCCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT727 | Streptococcus pneumoniae R6 |
40 |
31.25 |
0.238 |
| AT326 | Streptococcus pneumoniae TIGR4 |
40 |
31.25 |
0.238 |