TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Orphan Antitoxin (Protein)


Predicted family hicB (AT10132) Predicted domain PF01402 (RHH)
Locus tag orf1397 Length 86 a.a.
Coordinates 1474276..1474536 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf1390 1469641..1470096 + 456 ORF1390 Predicted ORF by PRODIGAL Version 1.20 -
orf1391 1470099..1470791 + 693 ORF1391 Predicted ORF by PRODIGAL Version 1.20 -
orf1392 1470801..1472189 + 1389 ORF1392 Predicted ORF by PRODIGAL Version 1.20 -
orf1393 1472189..1474186 + 1998 ORF1393 Predicted ORF by PRODIGAL Version 1.20 -
orf1394 1474276..1474536 - 261 ORF1394 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf1395 1474658..1476856 + 2199 ORF1395 Predicted ORF by PRODIGAL Version 1.20 -
orf1396 1476889..1478016 - 1128 ORF1396 Predicted ORF by PRODIGAL Version 1.20 -
orf1397 1478262..1479419 - 1158 ORF1397 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 9991.36 Da        Isoelectric Point: 7.3155

>ORF1394 Orphan_TA_29 Antitoxin
MYSKYDEAQFHLRLPHELHAKIKQRAKMNNRSLNSEIIAAIEESLAKQSSASVYIDDAER
MAEQQSDMVKKIVFDTLKELYKKDSS

Download         Length: 261 bp

>ORF1394 Orphan_TA_29 Antitoxin
TTAGCTGCTGTCTTTTTTATATAGCTCTTTGAGCGTATCAAAGACAATTTTCTTAACCAT
ATCAGATTGTTGTTCTGCCATACGCTCTGCATCGTCAATGTAAACAGATGCAGAGCTTTG
TTTAGCCAATGATTCTTCAATCGCTGCAATTATCTCTGAGTTCAGCGACCTGTTATTCAT
CTTCGCACGCTGCTTAATTTTCGCGTGGAGTTCATGCGGAAGTCTCAAGTGAAACTGCGC
CTCGTCGTATTTGCTGTACAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT10132 Acetobacter pasteurianus strain Ab3

38.71

28.182

0.14
AT10150 Escherichia coli strain JIE143 transconjugant Tx143

27.907

37.391

0.14