TAfinder detailed results

Overview

Job ID 9mizKMmBqU
Sequence name Escherichia coli strain DH5alpha chromosome, complete genome.
Predicted type I

Orphan Toxin (Protein)


Predicted family tisB (T6349) Predicted domain TisB_toxin (TisB)
Locus tag C1467_RS00200 Length 29 a.a.
Coordinates 30330..30419 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1467_RS00125 25427..26920 + 1494 WP_000828483.1 sulfatase-like hydrolase/transferase -
C1467_RS00130 26967..27416 - 450 WP_000511287.1 protein YidI -
C1467_RS00135 27526..27873 + 348 WP_000703959.1 YidH family protein -
C1467_RS00140 27863..28225 + 363 WP_001113432.1 DUF202 domain-containing protein -
C1467_RS00145 28222..28719 + 498 WP_000148063.1 radical SAM protein -
C1467_RS00150 28727..29911 - 1185 WP_001349998.1 multidrug efflux MFS transporter EmrD -
C1467_RS25260 29993..30067 + 75 WP_211180519.1 protein YsdE -
C1467_RS00160 30330..30419 - 90 WP_000060506.1 type I toxin-antitoxin system toxin TisB Toxin
C1467_RS00180 30984..31082 + 99 WP_001315912.1 ilvB operon leader peptide IvbL -
C1467_RS00185 31188..32876 + 1689 WP_000168480.1 acetolactate synthase large subunit -
C1467_RS00190 32880..33170 + 291 WP_001181706.1 acetolactate synthase small subunit -
C1467_RS00195 33245..33835 + 591 WP_000633668.1 transcriptional regulator UhpA -
C1467_RS00200 33835..35337 + 1503 WP_001295243.1 signal transduction histidine-protein kinase/phosphatase UhpB -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin

TisB_toxin (TisB) (E-value: 1.7e-15, Score:54.5)

(1-27)


Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 3195.08 Da        Isoelectric Point: 8.6905

>WP_000060506.1 Orphan_TA_1 Toxin
MSLVDIAILILKLIVAALQLLDAVLKYLK*

Download         Length: 90 bp

>WP_000060506.1 Orphan_TA_1 Toxin
TTACTTCAGGTATTTCAGAACAGCATCAAGCAGTTGCAGTGCTGCAACAATGAGTTTGAG
GATAAGAATGGCGATATCCACCAGGCTCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T6349 Escherichia coli BW2952

96.552

100

0.933
T6350 Escherichia coli str. K-12 substr. MG1655

96.552

100

0.933