MGE detailed information
MGE type: Prophage MGE length: 52655 bp
Accession: NZ_OU015340 Location: 315465..368119 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Replicon: chromosome
Accession: NZ_OU015340 Location: 315465..368119 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKR00_RS01765 () | 311658..312554 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| KKR00_RS01770 () | 312974..313585 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| KKR00_RS01775 () | 313594..314604 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| KKR00_RS01780 () | 314683..315468 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| KKR00_RS01785 () | 315465..316220 | - | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| KKR00_RS01790 () | 316299..317243 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| KKR00_RS01795 () | 317259..318578 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| KKR00_RS01800 () | 318695..319666 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| KKR00_RS01805 () | 319739..321181 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| KKR00_RS01810 () | 321305..322174 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| KKR00_RS01815 () | 322516..323991 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| KKR00_RS01820 () | 324226..326037 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| KKR00_RS01825 () | 326075..326716 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| KKR00_RS01830 () | 326816..327994 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| KKR00_RS01835 () | 328125..328415 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| KKR00_RS01840 () | 328483..328836 | + | 354 | WP_001042119.1 | protein YebF | - |
| KKR00_RS01845 () | 328930..329589 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| KKR00_RS01850 () | 329802..331853 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| KKR00_RS01855 () | 331888..332586 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| KKR00_RS01860 () | 332610..333266 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| KKR00_RS01865 () | 333374..333604 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| KKR00_RS01870 () | 333742..334116 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| KKR00_RS01875 () | 334117..334992 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| KKR00_RS01880 () | 335009..335362 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 335462..335607 | - | 146 | - | - | Antitoxin Detail |
| - | 335502..335605 | + | 104 | - | - | Toxin Detail |
| KKR00_RS01885 () | 335736..336659 | - | 924 | Protein_375 | hypothetical protein ; Integrase | Integrase |
| KKR00_RS26395 () | 336923..337384 | - | 462 | Protein_376 | DNA breaking-rejoining protein | - |
| KKR00_RS01895 () | 337373..337564 | + | 192 | Protein_377 | glycoside hydrolase family 19 protein | - |
| KKR00_RS01900 () | 337618..338151 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| KKR00_RS01905 () | 338408..338575 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| KKR00_RS01910 () | 338640..338828 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| KKR00_RS01915 () | 338883..339143 | + | 261 | Protein_381 | DUF1441 family protein | - |
| KKR00_RS01920 () | 339358..339702 | + | 345 | Protein_382 | macro domain-containing protein | - |
| KKR00_RS01925 () | 339712..340182 | + | 471 | Protein_383 | tail fiber assembly protein | - |
| KKR00_RS01930 () | 340279..340479 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| KKR00_RS26400 () | 340869..341049 | - | 181 | Protein_385 | IS3 family transposase | - |
| KKR00_RS01935 () | 341049..341174 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| KKR00_RS26405 () | 341828..341995 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| KKR00_RS01945 () | 342322..342936 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| KKR00_RS01950 () | 342946..343104 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| KKR00_RS01955 () | 343237..344151 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| KKR00_RS01960 () | 344751..344969 | + | 219 | WP_001750074.1 | hypothetical protein | - |
| KKR00_RS01965 () | 345464..345886 | - | 423 | Protein_392 | hypothetical protein ; Integrase | Integrase |
| KKR00_RS01970 () | 345956..347150 | + | 1195 | Protein_393 | IS256 family transposase IS285 | Transposase |
| KKR00_RS01975 () | 347296..347436 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| KKR00_RS01980 () | 347602..347871 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| KKR00_RS01985 () | 348241..348660 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| KKR00_RS01990 () | 349048..349524 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| KKR00_RS01995 () | 349854..350249 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| KKR00_RS02000 () | 350932..351654 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| KKR00_RS02005 () | 351939..352103 | + | 165 | WP_001134856.1 | membrane protein | - |
| KKR00_RS02010 () | 352327..352977 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| KKR00_RS02015 () | 352996..353187 | - | 192 | WP_000457836.1 | YebW family protein | - |
| KKR00_RS02020 () | 353298..353534 | - | 237 | WP_024131108.1 | YebV family protein | - |
| KKR00_RS02025 () | 353652..355091 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| KKR00_RS02030 () | 355169..357802 | - | 2634 | WP_001535256.1 | Intermembrane transport protein YebT | VF |
| KKR00_RS02035 () | 357771..359054 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| KKR00_RS02040 () | 359183..359680 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| KKR00_RS02045 () | 359778..360464 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| KKR00_RS02050 () | 360484..362532 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| KKR00_RS02055 () | 362726..363607 | + | 882 | WP_000984498.1 | protease HtpX | - |
| KKR00_RS02060 () | 363655..365028 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| KKR00_RS02065 () | 365204..365995 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| KKR00_RS02070 () | 366207..366446 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| KKR00_RS02075 () | 366604..366747 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| KKR00_RS02080 () | 366818..367105 | + | 288 | WP_001000660.1 | YebO family protein | - |
| KKR00_RS02085 () | 367754..367897 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| KKR00_RS02090 () | 367910..368119 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| KKR00_RS02095 () | 368339..370084 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| KKR00_RS02100 () | 370150..370959 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| KKR00_RS02105 () | 370956..371522 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| KKR00_RS02110 () | 371932..372390 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.008 |