MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_OU015340 Location: 1975797..1989770 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Replicon: chromosome
Accession: NZ_OU015340 Location: 1975797..1989770 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKR00_RS10295 () | 1971368..1973812 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| KKR00_RS10300 () | 1973921..1974688 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| KKR00_RS10305 () | 1975059..1975466 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| KKR00_RS10310 () | 1975797..1976516 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| KKR00_RS10315 () | 1976520..1976735 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| KKR00_RS10320 () | 1976852..1977799 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| KKR00_RS10325 () | 1978291..1978531 | - | 241 | Protein_2036 | PerC family transcriptional regulator | - |
| KKR00_RS10330 () | 1978614..1979435 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| KKR00_RS10335 () | 1979841..1980311 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| KKR00_RS10340 () | 1980333..1982843 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| KKR00_RS10345 () | 1982867..1983604 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| KKR00_RS10350 () | 1983688..1984200 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| KKR00_RS10355 () | 1984950..1985654 | - | 705 | Protein_2042 | integrase core domain-containing protein | - |
| KKR00_RS10360 () | 1985707..1985955 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| KKR00_RS10365 () | 1986057..1986365 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| KKR00_RS26485 () | 1986448..1986564 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 1986649..1987071 | - | 423 | - | - | Antitoxin Detail |
| KKR00_RS10375 () | 1986806..1987081 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| KKR00_RS10380 () | 1987134..1987571 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| KKR00_RS10385 () | 1988134..1988580 | - | 447 | WP_000935097.1 | protein SciX | - |
| KKR00_RS10390 () | 1988574..1989443 | - | 870 | Protein_2049 | hypothetical protein | VF |
| KKR00_RS10395 () | 1989507..1989770 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| KKR00_RS10400 () | 1989764..1993858 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| KKR00_RS10405 () | 1993877..1994323 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |