MGE detailed information
MGE type: Genomic_island MGE length: 27523 bp
Accession: NZ_NQJO01000001 Location: 1976145..2003667 Organism: Erwinia amylovora strain CTBT3-1 tig00000000 Replicon: chromosome
Accession: NZ_NQJO01000001 Location: 1976145..2003667 Organism: Erwinia amylovora strain CTBT3-1 tig00000000 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS942_RS09250 | 1971668..1972948 | - | 1281 | WP_099258130.1 | two-component system sensor histidine kinase RstB | - |
| CS942_RS09255 | 1972977..1973681 | - | 705 | WP_004157640.1 | site-specific integrase | - |
| CS942_RS09260 | 1973683..1974351 | + | 669 | WP_004157639.1 | DUF2612 domain-containing protein | - |
| CS942_RS09265 | 1974355..1975290 | + | 936 | WP_004157638.1 | hypothetical protein | - |
| CS942_RS09270 | 1975291..1975881 | - | 591 | WP_223386180.1 | DapH/DapD/GlmU-related protein | - |
| CS942_RS09280 | 1976511..1976783 | + | 273 | WP_004157637.1 | hypothetical protein | - |
| CS942_RS19100 | 1976794..1976967 | + | 174 | WP_013036045.1 | hypothetical protein | - |
| CS942_RS19105 | 1977062..1977235 | + | 174 | WP_004157636.1 | hypothetical protein | - |
| CS942_RS09285 | 1977493..1977705 | + | 213 | WP_004157635.1 | hypothetical protein | - |
| CS942_RS09295 | 1978576..1979577 | - | 1002 | WP_004157633.1 | acyltransferase | - |
| CS942_RS09300 | 1979633..1980043 | - | 411 | WP_004157632.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CS942_RS09305 | 1980066..1980245 | - | 180 | WP_012906750.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CS942_RS09310 | 1980765..1981493 | - | 729 | WP_099258131.1 | Transcriptional regulatory protein RstA | VF |
| CS942_RS09315 | 1981670..1982134 | + | 465 | WP_099258132.1 | hypothetical protein | - |
| CS942_RS09320 | 1982138..1983529 | - | 1392 | WP_004157625.1 | amino acid permease | - |
| CS942_RS09325 | 1983737..1984687 | - | 951 | WP_004157624.1 | DUF1471 family protein YdgH | - |
| CS942_RS09330 | 1985286..1986041 | + | 756 | WP_004157623.1 | hypothetical protein | - |
| CS942_RS09335 | 1986141..1986425 | - | 285 | WP_306475110.1 | DUF2534 family protein | - |
| CS942_RS09340 | 1986431..1988413 | - | 1983 | WP_099258133.1 | TonB-dependent copper receptor | - |
| CS942_RS09345 | 1988624..1989103 | - | 480 | WP_099258134.1 | DUF2946 domain-containing protein | - |
| CS942_RS09350 | 1989260..1990210 | - | 951 | WP_004157615.1 | universal stress protein UspE | - |
| CS942_RS09355 | 1990324..1991079 | - | 756 | WP_004157614.1 | FNR family transcription factor | - |
| CS942_RS09360 | 1991404..1991958 | + | 555 | WP_013036039.1 | DNA endonuclease SmrA | - |
| CS942_RS09365 | 1992018..1992212 | - | 195 | WP_004157612.1 | hypothetical protein | - |
| CS942_RS09370 | 1993210..1994253 | + | 1044 | WP_099258135.1 | acyltransferase | - |
| CS942_RS09380 | 1994749..1996077 | + | 1329 | WP_004157608.1 | 4-hydroxybenzoate transporter PcaK | VF |
| CS942_RS09385 | 1996180..1997706 | + | 1527 | WP_004157607.1 | carboxylesterase/lipase family protein | - |
| CS942_RS09390 | 1997902..1999539 | + | 1638 | WP_004157606.1 | Methyl-accepting chemotaxis protein II | VF |
| CS942_RS09395 | 1999774..2003667 | + | 3894 | WP_004157605.1 | hypothetical protein | - |
| CS942_RS09400 | 2003868..2005106 | - | 1239 | WP_004157604.1 | peptidase T | - |
| CS942_RS09405 | 2005335..2006933 | + | 1599 | WP_004157592.1 | ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora isolate CP20086202 | Genomic island | TA206006 | NZ_CP076594 | 1687058..1714580 | 0.001 | |
| Erwinia amylovora strain Ea915 | Genomic island | TA257036 | NZ_CP104025 | 1866154..1893676 | 0.001 |