MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82266 bp
Accession: NZ_LT960613 Location: 1..82266 Organism: Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 Replicon: plasmid P
Accession: NZ_LT960613 Location: 1..82266 Organism: Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 Replicon: plasmid P
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VTAP4600_RS25335 () | 267..494 | + | 228 | WP_012396984.1 | hypothetical protein | - |
| VTAP4600_RS25345 () | 1200..1595 | - | 396 | WP_102521425.1 | helix-turn-helix domain-containing protein | - |
| VTAP4600_RS25350 () | 1716..2858 | + | 1143 | WP_102521426.1 | hypothetical protein | - |
| VTAP4600_RS25355 () | 2871..3152 | + | 282 | WP_012396988.1 | RstB1 protein | - |
| VTAP4600_RS25360 () | 3149..3502 | + | 354 | WP_012396989.1 | hypothetical protein | - |
| VTAP4600_RS25365 () | 3572..3793 | + | 222 | WP_012396990.1 | hypothetical protein | - |
| VTAP4600_RS25370 () | 4062..4241 | + | 180 | WP_012396991.1 | TraY domain-containing protein | - |
| VTAP4600_RS25375 () | 4805..5092 | + | 288 | WP_012396992.1 | type IV conjugative transfer system pilin TraA | - |
| VTAP4600_RS25380 () | 5102..5404 | + | 303 | WP_012396993.1 | type IV conjugative transfer system protein TraL | - |
| VTAP4600_RS25385 () | 5414..5989 | + | 576 | WP_012396994.1 | type IV conjugative transfer system protein TraE | - |
| VTAP4600_RS25390 () | 5976..6767 | + | 792 | WP_102523821.1 | type-F conjugative transfer system secretin TraK | - |
| VTAP4600_RS25395 () | 6757..8265 | + | 1509 | WP_012396996.1 | TraB/VirB10 family protein | - |
| VTAP4600_RS25400 () | 8269..8649 | + | 381 | WP_012396997.1 | type IV conjugative transfer system lipoprotein TraV | - |
| VTAP4600_RS25405 () | 8663..9025 | + | 363 | WP_012396998.1 | hypothetical protein | - |
| VTAP4600_RS25410 () | 9041..11589 | + | 2549 | Protein_14 | type IV secretion system protein TraC | - |
| VTAP4600_RS25415 () | 11546..12286 | + | 741 | WP_102525547.1 | type-F conjugative transfer system protein TraW | - |
| VTAP4600_RS25420 () | 12412..13422 | + | 1011 | WP_012397000.1 | conjugal transfer pilus assembly protein TraU | - |
| VTAP4600_RS25430 () | 13750..13974 | + | 225 | WP_012397002.1 | hypothetical protein | - |
| VTAP4600_RS25435 () | 13993..14700 | + | 708 | WP_012397003.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| VTAP4600_RS25440 () | 14714..16444 | + | 1731 | WP_012397004.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| VTAP4600_RS25445 () | 16492..17277 | + | 786 | WP_102525548.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| VTAP4600_RS25450 () | 17367..17780 | + | 414 | WP_012397006.1 | conjugal transfer protein TraF | - |
| VTAP4600_RS25455 () | 17777..19108 | + | 1332 | WP_012397007.1 | conjugal transfer protein TraH | - |
| VTAP4600_RS25460 () | 19186..22017 | + | 2832 | WP_012397008.1 | conjugal transfer mating pair stabilization protein TraG | - |
| VTAP4600_RS25465 () | 22110..22640 | + | 531 | WP_012397009.1 | hypothetical protein | - |
| VTAP4600_RS25470 () | 22665..22892 | + | 228 | WP_012397010.1 | hypothetical protein | - |
| VTAP4600_RS25475 () | 23569..24036 | + | 468 | WP_102525551.1 | hypothetical protein | - |
| VTAP4600_RS25480 () | 24060..24452 | + | 393 | WP_012397012.1 | hypothetical protein | - |
| VTAP4600_RS25485 () | 24563..26668 | + | 2106 | WP_012397013.1 | type IV conjugative transfer system coupling protein TraD | - |
| VTAP4600_RS25490 () | 26736..26915 | + | 180 | WP_012397014.1 | hypothetical protein | - |
| VTAP4600_RS25495 () | 27144..27371 | + | 228 | WP_102525549.1 | hypothetical protein | - |
| VTAP4600_RS26060 () | 27372..27515 | - | 144 | WP_172443237.1 | hypothetical protein | - |
| VTAP4600_RS25500 () | 27560..29083 | + | 1524 | WP_012397017.1 | hypothetical protein | - |
| VTAP4600_RS25505 () | 29174..34951 | + | 5778 | WP_012397018.1 | hypothetical protein | Relaxase |
| VTAP4600_RS25510 () | 35052..36374 | + | 1323 | WP_012397019.1 | IS4 family transposase ISCro6 | Transposase |
| VTAP4600_RS25515 () | 36398..36757 | - | 360 | WP_012397020.1 | hypothetical protein | - |
| VTAP4600_RS25520 () | 37349..37792 | - | 444 | WP_012397021.1 | hypothetical protein | VF |
| VTAP4600_RS25525 () | 37854..38189 | - | 336 | WP_012397022.1 | hypothetical protein | - |
| VTAP4600_RS25530 () | 38274..38660 | - | 387 | WP_012397023.1 | hypothetical protein | - |
| VTAP4600_RS25535 () | 38684..39028 | - | 345 | WP_012397024.1 | hypothetical protein | - |
| VTAP4600_RS25540 () | 39712..41535 | - | 1824 | WP_102525550.1 | ParB/RepB/Spo0J family partition protein | - |
| VTAP4600_RS25545 () | 42416..42748 | + | 333 | WP_012397026.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VTAP4600_RS25550 () | 42735..43049 | + | 315 | WP_012397027.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| VTAP4600_RS25555 () | 43465..43956 | + | 492 | WP_012397028.1 | RDD family protein | - |
| VTAP4600_RS25560 () | 44552..46084 | + | 1533 | WP_102521770.1 | IS21 family transposase ISVch3 | Transposase |
| VTAP4600_RS25565 () | 46094..46834 | + | 741 | WP_012397030.1 | IS21 family transposase ISVch3 | Transposase |
| VTAP4600_RS25570 () | 46979..47446 | + | 468 | WP_012397031.1 | hypothetical protein | - |
| VTAP4600_RS25575 () | 47578..48066 | + | 489 | WP_131825470.1 | hypothetical protein | - |
| VTAP4600_RS25580 () | 48330..48923 | + | 594 | WP_012397033.1 | tyrosine-type recombinase/integrase | - |
| VTAP4600_RS25585 () | 49111..49515 | + | 405 | WP_012397034.1 | hypothetical protein | Antitoxin Detail |
| VTAP4600_RS25590 () | 49518..50459 | + | 942 | WP_012397035.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| VTAP4600_RS25595 () | 50467..53061 | + | 2595 | WP_012397036.1 | type I restriction-modification system subunit M | - |
| VTAP4600_RS25600 () | 53054..54313 | + | 1260 | WP_012397037.1 | restriction endonuclease subunit S | - |
| VTAP4600_RS25605 () | 54475..57591 | + | 3117 | WP_012397038.1 | HsdR family type I site-specific deoxyribonuclease | - |
| VTAP4600_RS25610 () | 58202..59176 | - | 975 | WP_012397039.1 | Abi family protein | - |
| VTAP4600_RS25615 () | 59717..62161 | + | 2445 | Protein_55 | hypothetical protein | - |
| VTAP4600_RS25620 () | 62574..62870 | - | 297 | WP_012397042.1 | hypothetical protein | - |
| VTAP4600_RS25630 () | 63134..63598 | - | 465 | WP_012397044.1 | hypothetical protein | - |
| VTAP4600_RS25635 () | 63614..64084 | - | 471 | WP_012397045.1 | hypothetical protein | - |
| VTAP4600_RS25640 () | 64610..64846 | - | 237 | WP_102523757.1 | DinI-like family protein | - |
| VTAP4600_RS25860 () | 64986..65195 | - | 210 | WP_012397048.1 | hypothetical protein | - |
| VTAP4600_RS25645 () | 65535..66137 | + | 603 | WP_012397049.1 | DUF2913 family protein | - |
| VTAP4600_RS25650 () | 66185..66334 | + | 150 | Protein_62 | hypothetical protein | VF |
| VTAP4600_RS25655 () | 66386..67102 | - | 717 | Protein_63 | IS6 family transposase | - |
| VTAP4600_RS25660 () | 67198..67614 | - | 417 | WP_012397051.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| VTAP4600_RS25665 () | 67623..67937 | - | 315 | WP_102523759.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| VTAP4600_RS25670 () | 68137..68748 | + | 612 | WP_102524025.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| VTAP4600_RS25680 () | 69525..70388 | + | 864 | WP_012397054.1 | endonuclease/exonuclease/phosphatase family protein | - |
| VTAP4600_RS25685 () | 70575..71312 | + | 738 | WP_012397055.1 | IS6 family transposase ISPpr9 | Transposase |
| VTAP4600_RS25690 () | 71589..72565 | + | 977 | Protein_69 | IS5 family transposase ISLlo3 | Transposase |
| VTAP4600_RS25695 () | 73090..73524 | + | 435 | WP_012397058.1 | hypothetical protein | - |
| VTAP4600_RS25700 () | 73680..74417 | - | 738 | WP_012397059.1 | IS6 family transposase ISPpr9 | Transposase |
| VTAP4600_RS25705 () | 74489..74770 | - | 282 | WP_012397060.1 | hypothetical protein | - |
| VTAP4600_RS25710 () | 74780..75424 | - | 645 | WP_102523761.1 | hypothetical protein | - |
| VTAP4600_RS25715 () | 75406..75624 | - | 219 | WP_012397062.1 | hypothetical protein | - |
| VTAP4600_RS25725 () | 76285..76656 | - | 372 | WP_012397063.1 | hypothetical protein | - |
| VTAP4600_RS25730 () | 76653..77117 | - | 465 | Protein_76 | hypothetical protein | - |
| VTAP4600_RS25735 () | 77104..77508 | - | 405 | WP_012397064.1 | hypothetical protein | - |
| VTAP4600_RS25740 () | 77498..78472 | - | 975 | WP_012397065.1 | ParB/RepB/Spo0J family partition protein | - |
| VTAP4600_RS25745 () | 78469..79266 | - | 798 | WP_012397066.1 | ParA family protein | - |
| VTAP4600_RS25750 () | 79311..79556 | - | 246 | WP_172443138.1 | DUF4158 domain-containing protein | - |
| VTAP4600_RS25755 () | 79557..79646 | + | 90 | Protein_81 | recombinase family protein | - |
| VTAP4600_RS25760 () | 80849..81676 | - | 828 | WP_102523763.1 | hypothetical protein | - |
| VTAP4600_RS26065 () | 81663..81803 | - | 141 | WP_172443139.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|