MGE detailed information
MGE type: IScluster/Tn MGE length: 12697 bp
Accession: NZ_LT549890 Location: 1852741..1865437 Organism: Saccharolobus solfataricus strain P1 Replicon: chromosome
Accession: NZ_LT549890 Location: 1852741..1865437 Organism: Saccharolobus solfataricus strain P1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSOP1_RS09945 (SSOP1_2087) | 1848823..1849299 | + | 477 | WP_009991752.1 | hypothetical protein | - |
| SSOP1_RS09950 (SSOP1_2088) | 1849343..1850209 | + | 867 | WP_009991750.1 | SPFH domain-containing protein | - |
| SSOP1_RS09955 (SSOP1_2089) | 1850190..1850606 | + | 417 | WP_010923699.1 | hypothetical protein | - |
| SSOP1_RS17715 | 1850711..1850851 | + | 141 | Protein_2000 | ISNCY family transposase | - |
| SSOP1_RS09960 (SSOP1_2091) | 1851000..1851773 | - | 774 | WP_009991748.1 | extradiol dioxygenase | - |
| SSOP1_RS09965 (SSOP1_2092) | 1852029..1852454 | - | 426 | WP_009991747.1 | DUF4143 domain-containing protein | - |
| SSOP1_RS09970 (SSOP1_2093) | 1852741..1853097 | + | 357 | Protein_2003 | IS607 family transposase ISC1913 | Transposase |
| SSOP1_RS09975 (SSOP1_2094) | 1853173..1854123 | - | 951 | WP_010923701.1 | IS110 family transposase ISC1190 | Transposase |
| SSOP1_RS09980 (SSOP1_2095) | 1854282..1854566 | + | 285 | Protein_2005 | IS607 family transposase ISC1913 | Transposase |
| SSOP1_RS09985 (SSOP1_2096) | 1854550..1855770 | + | 1221 | WP_014511730.1 | IS607 family transposase ISC1913 | Transposase |
| SSOP1_RS09990 (SSOP1_2097) | 1855918..1856304 | - | 387 | WP_009991912.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| SSOP1_RS09995 (SSOP1_2098) | 1856291..1856566 | - | 276 | WP_009991915.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| SSOP1_RS10000 (SSOP1_2099) | 1856937..1857173 | + | 237 | WP_009991916.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| SSOP1_RS10005 (SSOP1_2100) | 1857151..1857549 | + | 399 | WP_009991918.1 | type II toxin-antitoxin system VapC family toxin | - |
| SSOP1_RS10010 (SSOP1_2101) | 1857938..1858162 | + | 225 | WP_009991920.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| SSOP1_RS10015 (SSOP1_2102) | 1858152..1858544 | + | 393 | WP_009991922.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| SSOP1_RS10020 | 1858718..1859663 | + | 946 | Protein_2013 | IS110 family transposase ISC1190 | Transposase |
| SSOP1_RS10025 (SSOP1_2105) | 1859767..1860915 | - | 1149 | WP_010923706.1 | RNA-guided endonuclease TnpB family protein | - |
| SSOP1_RS10030 (SSOP1_2106) | 1861192..1861569 | - | 378 | WP_009989379.1 | type II toxin-antitoxin system VapC family toxin | - |
| SSOP1_RS10035 (SSOP1_2107) | 1861535..1861789 | - | 255 | WP_009989377.1 | antitoxin VapB family protein | - |
| SSOP1_RS10040 (SSOP1_2108) | 1862018..1862362 | - | 345 | WP_009989373.1 | heavy metal-binding domain-containing protein | - |
| SSOP1_RS10045 (SSOP1_2109) | 1862666..1863064 | - | 399 | WP_009989371.1 | hypothetical protein | - |
| SSOP1_RS10050 (SSOP1_2110) | 1863417..1864145 | + | 729 | Protein_2019 | ISH3 family transposase ISSis6 | Transposase |
| SSOP1_RS10055 (SSOP1_2111) | 1864193..1865437 | - | 1245 | WP_010923708.1 | IS256 family transposase ISC1332 | Transposase |
| SSOP1_RS10060 (SSOP1_2112) | 1865481..1865816 | + | 336 | Protein_2021 | ISH3 family transposase | - |
| SSOP1_RS10065 (SSOP1_2113) | 1865833..1867539 | + | 1707 | WP_009990957.1 | hypothetical protein | - |
| SSOP1_RS10070 (SSOP1_2114) | 1867543..1869465 | + | 1923 | WP_010923710.1 | hypothetical protein | - |
| SSOP1_RS10075 (SSOP1_2116) | 1869983..1870432 | + | 450 | WP_009993005.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Sulfolobus solfataricus P2 | IScluster/Tn | TA951, TA20405 | NC_002754 | 1779283..1791979 | 0 |