MGE detailed information
MGE type: Genomic_island MGE length: 11005 bp
Accession: NZ_LT220504 Location: 1739484..1750488 Organism: Lacticaseibacillus rhamnosus strain BPL5 Replicon: chromosome
Accession: NZ_LT220504 Location: 1739484..1750488 Organism: Lacticaseibacillus rhamnosus strain BPL5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BN3853_RS08125 () | 1735454..1735741 | + | 288 | WP_005691648.1 | hypothetical protein | - |
| BN3853_RS08130 () | 1735953..1737686 | - | 1734 | WP_005691647.1 | pyruvate oxidase | - |
| BN3853_RS08135 () | 1738275..1739156 | + | 882 | WP_005684263.1 | class II fructose-1,6-bisphosphate aldolase | - |
| BN3853_RS08140 () | 1739285..1739503 | - | 219 | WP_005691646.1 | hypothetical protein | - |
| BN3853_RS08150 () | 1739735..1740916 | - | 1182 | WP_014571132.1 | transposase | - |
| BN3853_RS08155 () | 1740951..1741547 | - | 597 | WP_005691643.1 | IS607 family transposase ISCbt3 | Transposase |
| BN3853_RS08160 () | 1741690..1742265 | - | 576 | WP_014571131.1 | DNA-3-methyladenine glycosylase I | - |
| BN3853_RS08165 () | 1742419..1743582 | - | 1164 | WP_005691640.1 | MFS transporter | - |
| BN3853_RS08170 () | 1743664..1743957 | - | 294 | WP_005684269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BN3853_RS08175 () | 1744200..1744448 | - | 249 | WP_005691639.1 | hypothetical protein | - |
| BN3853_RS08180 () | 1745010..1745282 | + | 273 | WP_014571130.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BN3853_RS14865 () | 1745310..1745495 | + | 186 | WP_005691636.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| BN3853_RS08185 () | 1745719..1747134 | + | 1416 | WP_005691634.1 | DNA polymerase III subunit epsilon | - |
| BN3853_RS08190 () | 1747377..1748252 | - | 876 | WP_024305787.1 | XRE family transcriptional regulator | - |
| BN3853_RS08200 () | 1748699..1749307 | + | 609 | WP_005691630.1 | hypothetical protein | - |
| BN3853_RS08205 () | 1749799..1750488 | - | 690 | WP_005691628.1 | rhomboid family intramembrane serine protease | - |
| BN3853_RS08210 () | 1751018..1751446 | + | 429 | WP_005691626.1 | OsmC family protein | - |
| BN3853_RS08215 () | 1751639..1752658 | + | 1020 | WP_005691624.1 | dihydroxyacetone kinase subunit DhaK | - |
| BN3853_RS08220 () | 1752645..1753226 | + | 582 | WP_005691622.1 | dihydroxyacetone kinase subunit L | - |
| BN3853_RS08225 () | 1753375..1753743 | + | 369 | WP_005686376.1 | PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM | - |
| BN3853_RS08230 () | 1753833..1754399 | + | 567 | WP_005691618.1 | TetR/AcrR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus rhamnosus Lc 705 | Genomic island | TA6139 | NC_013199 | 509097..519119 | 0.004 | |
| Lactobacillus rhamnosus ATCC 8530 | Genomic island | TA6144, TA6239 | NC_017491 | 509273..519295 | 0.004 |