MGE detailed information
MGE type: IScluster/Tn MGE length: 9815 bp
Accession: NZ_LS997868 Location: 607167..616981 Organism: Vibrio cholerae strain NCTC 30 Replicon: chromosome
Accession: NZ_LS997868 Location: 607167..616981 Organism: Vibrio cholerae strain NCTC 30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5R51_RS16980 () | 602837..603073 | + | 237 | WP_162810550.1 | DUF3709 domain-containing protein | - |
| D5R51_RS16990 () | 603407..603631 | + | 225 | Protein_603 | VOC family protein | - |
| D5R51_RS16995 () | 603948..604118 | + | 171 | Protein_604 | DUF645 family protein | - |
| D5R51_RS17005 () | 604315..604584 | - | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| D5R51_RS17010 () | 604577..604855 | - | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| D5R51_RS17020 () | 605209..605391 | + | 183 | WP_072668508.1 | DUF645 family protein | - |
| D5R51_RS17025 () | 605723..605893 | + | 171 | WP_113600562.1 | DUF3709 domain-containing protein | - |
| D5R51_RS17030 () | 606226..606642 | + | 417 | WP_119091961.1 | DUF1311 domain-containing protein | - |
| D5R51_RS17040 () | 606809..607111 | + | 303 | Protein_610 | isochorismatase family protein | - |
| D5R51_RS17045 () | 607167..608208 | - | 1042 | Protein_611 | IS481 family transposase ISVvu4 | Transposase |
| D5R51_RS17050 () | 608317..608562 | + | 246 | Protein_612 | isochorismatase family protein | - |
| D5R51_RS17055 () | 608736..609149 | + | 414 | WP_119091962.1 | GNAT family N-acetyltransferase | - |
| D5R51_RS17060 () | 609260..609444 | + | 185 | Protein_614 | DUF3709 domain-containing protein | - |
| D5R51_RS17065 () | 609441..609674 | + | 234 | WP_033930090.1 | DUF3709 domain-containing protein | - |
| D5R51_RS17070 () | 609969..610271 | + | 303 | WP_119091963.1 | hypothetical protein | - |
| D5R51_RS17075 () | 610394..610684 | - | 291 | WP_076008724.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS17080 () | 610674..610922 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D5R51_RS17090 () | 611201..611457 | + | 257 | Protein_619 | DUF645 family protein | - |
| D5R51_RS17100 () | 611652..612146 | + | 495 | WP_119091965.1 | GNAT family N-acetyltransferase | - |
| D5R51_RS17105 () | 612255..613295 | + | 1041 | WP_057645437.1 | IS481 family transposase ISVvu4 | Transposase |
| D5R51_RS17110 () | 613355..613915 | + | 561 | Protein_622 | hypothetical protein | - |
| D5R51_RS17115 () | 613939..614049 | + | 111 | WP_071936869.1 | DUF3265 domain-containing protein | - |
| D5R51_RS17120 () | 614124..614435 | + | 312 | WP_162892124.1 | DUF3709 domain-containing protein | - |
| D5R51_RS17125 () | 614755..615021 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| D5R51_RS17130 () | 615008..615253 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| D5R51_RS17140 () | 615392..615862 | - | 471 | WP_119091966.1 | RES family NAD+ phosphorylase | - |
| D5R51_RS17145 () | 615862..616314 | - | 453 | WP_119091967.1 | DUF2384 domain-containing protein | - |
| D5R51_RS17150 () | 616421..617212 | - | 792 | Protein_629 | IS110 family transposase ISSde13 | Transposase |
| D5R51_RS17155 () | 617530..618516 | - | 987 | WP_001170903.1 | sulfate ABC transporter substrate-binding protein | - |
| D5R51_RS17160 () | 619182..619409 | + | 228 | WP_119091968.1 | hypothetical protein | - |
| D5R51_RS17165 () | 619527..620631 | + | 1105 | Protein_632 | hypothetical protein | - |
| D5R51_RS19015 () | 620647..620823 | - | 177 | WP_162892125.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|