MGE detailed information
MGE type: Conjugative plasmid MGE length: 91228 bp
Accession: NZ_LR890509 Location: 1..91228 Organism: Escherichia coli isolate MSB1_9I-sc-2280417 Replicon: plasmid 2
Accession: NZ_LR890509 Location: 1..91228 Organism: Escherichia coli isolate MSB1_9I-sc-2280417 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW57_RS22960 () | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| JMW57_RS22965 () | 1257..1997 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| JMW57_RS22970 () | 2118..2252 | - | 135 | Protein_2 | serine/threonine protein kinase | - |
| JMW57_RS22975 () | 2385..3471 | + | 1087 | Protein_3 | IS3 family transposase IS3F | Transposase |
| JMW57_RS22980 () | 3670..4759 | + | 1090 | Protein_4 | IS3 family transposase | - |
| JMW57_RS22985 () | 5111..10213 | + | 5103 | WP_201524625.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JMW57_RS22990 () | 10297..10533 | + | 237 | WP_106371924.1 | hypothetical protein | - |
| JMW57_RS22995 () | 10977..11669 | + | 693 | WP_094323964.1 | hypothetical protein | - |
| JMW57_RS23000 () | 12952..13140 | + | 189 | WP_089606809.1 | hypothetical protein | - |
| JMW57_RS23005 () | 13743..14156 | + | 414 | WP_097731872.1 | hypothetical protein | - |
| JMW57_RS23010 () | 14163..14726 | + | 564 | WP_097731873.1 | polymer-forming cytoskeletal protein | - |
| JMW57_RS23015 () | 14890..15306 | + | 417 | WP_089606813.1 | hypothetical protein | - |
| JMW57_RS23020 () | 15421..16482 | + | 1062 | WP_097731874.1 | EAL domain-containing protein | - |
| JMW57_RS23025 () | 17060..18218 | - | 1159 | Protein_13 | IS3 family transposase IS3 | Transposase |
| JMW57_RS23030 () | 18286..19245 | + | 960 | Protein_14 | PhoPQ-regulated protein | - |
| JMW57_RS23035 () | 19464..20468 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| JMW57_RS23040 () | 20547..20760 | - | 214 | Protein_16 | Tn3 family transposase | - |
| JMW57_RS23045 () | 21074..22369 | - | 1296 | WP_016230924.1 | tricarballylate/proton symporter TcuC | - |
| JMW57_RS23050 () | 22424..23563 | - | 1140 | WP_097731802.1 | tricarballylate utilization 4Fe-4S protein TcuB | - |
| JMW57_RS23055 () | 23550..24953 | - | 1404 | WP_016230922.1 | FAD-dependent tricarballylate dehydrogenase TcuA | - |
| JMW57_RS23060 () | 25050..25976 | - | 927 | WP_097731803.1 | HTH-type transcriptional regulator CatM | VF |
| JMW57_RS23065 () | 26973..27830 | - | 858 | WP_097731804.1 | incFII family plasmid replication initiator RepA | - |
| JMW57_RS23070 () | 27823..28305 | - | 483 | WP_172949056.1 | hypothetical protein | - |
| JMW57_RS23075 () | 28298..28372 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| JMW57_RS23080 () | 28606..28863 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| JMW57_RS23085 () | 29147..29353 | - | 207 | WP_032355860.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 29340..29401 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29340..29401 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29340..29401 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29340..29401 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| JMW57_RS23090 () | 29984..30196 | - | 213 | WP_089574766.1 | hypothetical protein | - |
| JMW57_RS23095 () | 30329..30889 | - | 561 | WP_097731806.1 | fertility inhibition protein FinO | - |
| JMW57_RS23100 () | 30944..31690 | - | 747 | WP_201524626.1 | conjugal transfer pilus acetylase TraX | - |
| JMW57_RS23105 () | 31710..36980 | - | 5271 | WP_201524627.1 | Multifunctional conjugation protein TraI | Relaxase |
| JMW57_RS23110 () | 37062..37289 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | - |
| JMW57_RS23115 () | 37289..37687 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| JMW57_RS23120 () | 37696..39885 | - | 2190 | WP_201524628.1 | type IV conjugative transfer system coupling protein TraD | - |
| JMW57_RS23125 () | 40137..40868 | - | 732 | WP_123032535.1 | complement resistance protein TraT | - |
| JMW57_RS23130 () | 40900..41397 | - | 498 | WP_097731810.1 | entry exclusion protein | - |
| JMW57_RS23135 () | 41413..44235 | - | 2823 | WP_097731811.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JMW57_RS23140 () | 44232..45605 | - | 1374 | WP_000944319.1 | conjugal transfer protein TraH | - |
| JMW57_RS23145 () | 45605..46018 | - | 414 | WP_112030434.1 | F-type conjugal transfer protein TrbF | - |
| JMW57_RS23150 () | 45972..46313 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| JMW57_RS23155 () | 46243..46788 | - | 546 | WP_096972938.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JMW57_RS23160 () | 46775..47059 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JMW57_RS23165 () | 47140..47454 | + | 315 | WP_000415566.1 | protein ArtA | - |
| JMW57_RS23170 () | 47456..47803 | - | 348 | WP_096972937.1 | conjugal transfer protein TrbA | - |
| JMW57_RS23175 () | 47819..48562 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JMW57_RS23180 () | 48555..48812 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| JMW57_RS23185 () | 48839..50647 | - | 1809 | WP_112030435.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JMW57_RS23190 () | 50644..51282 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JMW57_RS23195 () | 51291..52283 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| JMW57_RS23200 () | 52280..52912 | - | 633 | WP_097731813.1 | type-F conjugative transfer system protein TraW | - |
| JMW57_RS23205 () | 52909..53295 | - | 387 | WP_097731814.1 | type-F conjugative transfer system protein TrbI | - |
| JMW57_RS23210 () | 53292..55919 | - | 2628 | WP_112030437.1 | type IV secretion system protein TraC | - |
| JMW57_RS23215 () | 56079..56300 | - | 222 | WP_112030438.1 | conjugal transfer protein TraR | - |
| JMW57_RS23220 () | 56435..56950 | - | 516 | WP_096979322.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JMW57_RS23225 () | 56947..57204 | - | 258 | WP_112034213.1 | conjugal transfer protein TrbG | - |
| JMW57_RS23230 () | 57197..57550 | - | 354 | WP_112030401.1 | conjugal transfer protein TrbD | - |
| JMW57_RS23235 () | 57504..58065 | - | 562 | Protein_55 | conjugal transfer protein TraP | - |
| JMW57_RS23240 () | 58055..59482 | - | 1428 | WP_112030400.1 | conjugal transfer protein TraB | - |
| JMW57_RS23245 () | 59482..60186 | - | 705 | WP_181573356.1 | type-F conjugative transfer system secretin TraK | - |
| JMW57_RS23250 () | 60197..60763 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| JMW57_RS23255 () | 60785..61096 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JMW57_RS23260 () | 61111..61476 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| JMW57_RS23265 () | 61509..61904 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| JMW57_RS23270 () | 62003..62692 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| JMW57_RS23275 () | 62879..63262 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| JMW57_RS23280 () | 63583..64185 | + | 603 | WP_112030399.1 | hypothetical protein | VF |
| JMW57_RS23285 () | 64481..65302 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| JMW57_RS23290 () | 65420..65707 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| JMW57_RS23295 () | 66179..66334 | - | 156 | WP_201524621.1 | hypothetical protein | - |
| JMW57_RS23300 () | 66629..66787 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 66831..67055 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66831..67055 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66831..67055 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66831..67055 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| JMW57_RS23305 () | 66867..67055 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| JMW57_RS23310 () | 67067..67786 | - | 720 | WP_112030397.1 | plasmid SOS inhibition protein A | - |
| JMW57_RS23315 () | 67783..68217 | - | 435 | WP_032217500.1 | conjugation system SOS inhibitor PsiB | - |
| JMW57_RS23320 () | 68272..70230 | - | 1959 | WP_112030396.1 | ParB/RepB/Spo0J family partition protein | - |
| JMW57_RS23325 () | 70295..70528 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| JMW57_RS23330 () | 70590..71129 | - | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| JMW57_RS23335 () | 71602..71757 | - | 156 | WP_165369128.1 | hypothetical protein | - |
| JMW57_RS23340 () | 72023..72586 | - | 564 | WP_201524622.1 | class I SAM-dependent methyltransferase | - |
| JMW57_RS23345 () | 72635..73117 | - | 483 | WP_201524623.1 | hypothetical protein | - |
| JMW57_RS23350 () | 73256..73504 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| JMW57_RS23355 () | 73501..73940 | + | 440 | Protein_79 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JMW57_RS23360 () | 73940..75211 | + | 1272 | WP_201524624.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| JMW57_RS23365 () | 75216..75608 | - | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| JMW57_RS23370 () | 75613..76584 | - | 972 | WP_112030391.1 | plasmid segregation protein parM | - |
| JMW57_RS23375 () | 76813..77457 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| JMW57_RS23380 () | 77451..77726 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| JMW57_RS23385 () | 77863..78645 | - | 783 | WP_112030390.1 | site-specific integrase | - |
| JMW57_RS23390 () | 78658..79368 | - | 711 | WP_112030389.1 | hypothetical protein | - |
| JMW57_RS23395 () | 79408..79758 | - | 351 | WP_000493380.1 | hypothetical protein | - |
| JMW57_RS23400 () | 80558..80848 | - | 291 | WP_112030388.1 | korC | - |
| JMW57_RS23405 () | 80845..81972 | - | 1128 | WP_112030387.1 | DUF4238 domain-containing protein | - |
| JMW57_RS23410 () | 82006..83598 | - | 1593 | WP_112030386.1 | hypothetical protein | - |
| JMW57_RS23415 () | 83878..84585 | - | 708 | Protein_91 | hypothetical protein | - |
| JMW57_RS23420 () | 84598..85097 | - | 500 | Protein_92 | hypothetical protein | - |
| JMW57_RS23425 () | 85482..86477 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| JMW57_RS23430 () | 86481..87413 | + | 933 | WP_112030385.1 | hypothetical protein | - |
| JMW57_RS23435 () | 87439..87633 | - | 195 | WP_077757823.1 | hypothetical protein | - |
| JMW57_RS23440 () | 89748..90389 | + | 642 | WP_000990665.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|