MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 52208 bp
Accession: NZ_LR890411 Location: 1..52208 Organism: Escherichia coli isolate MSB2_1A-sc-2280429 Replicon: plasmid 2
Accession: NZ_LR890411 Location: 1..52208 Organism: Escherichia coli isolate MSB2_1A-sc-2280429 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW04_RS23685 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| JMW04_RS23690 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| JMW04_RS23695 () | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| JMW04_RS23700 () | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| JMW04_RS23705 () | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| JMW04_RS23710 () | 4695..4967 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JMW04_RS23715 () | 5492..5928 | - | 437 | Protein_6 | IS3 family transposase IS2 | Transposase |
| JMW04_RS23720 () | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| JMW04_RS23725 () | 8277..8981 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JMW04_RS23730 () | 9219..9446 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| JMW04_RS23735 () | 9470..9661 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| JMW04_RS23740 () | 10143..10589 | - | 447 | Protein_11 | tunicamycin resistance protein | - |
| JMW04_RS23745 () | 10653..11357 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JMW04_RS23750 () | 11406..12311 | - | 906 | Protein_13 | IS4 family transposase IS10R | Transposase |
| JMW04_RS23755 () | 12421..13383 | - | 963 | Protein_14 | IS4 family transposase IS10R | Transposase |
| JMW04_RS23760 () | 13526..14386 | + | 861 | WP_000557454.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| JMW04_RS23765 () | 14399..14503 | + | 105 | Protein_16 | tunicamycin resistance protein | - |
| JMW04_RS23770 () | 14555..15259 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JMW04_RS23775 () | 15558..16418 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JMW04_RS23780 () | 16568..16666 | - | 99 | Protein_19 | IS1 family transposase | - |
| JMW04_RS23785 () | 16695..18005 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| JMW04_RS23790 () | 18290..18691 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| JMW04_RS23795 () | 18624..18881 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| JMW04_RS23800 () | 18974..19627 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| JMW04_RS23805 () | 20090..20629 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| JMW04_RS23810 () | 21272..21478 | - | 207 | WP_001774176.1 | hypothetical protein | - |
| JMW04_RS23815 () | 21504..22067 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| JMW04_RS23820 () | 22115..23476 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| JMW04_RS23825 () | 23528..23758 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| JMW04_RS23830 () | 24793..24984 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| JMW04_RS23835 () | 24981..25403 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| JMW04_RS23840 () | 25450..25752 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| JMW04_RS23845 () | 26292..27068 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| JMW04_RS23850 () | 27119..27553 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| JMW04_RS23855 () | 27567..27788 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| JMW04_RS23860 () | 27789..28472 | - | 684 | WP_000086185.1 | DNA methylase | - |
| JMW04_RS23865 () | 28549..28853 | - | 305 | Protein_36 | hypothetical protein | - |
| JMW04_RS23870 () | 28857..29759 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| JMW04_RS23875 () | 30626..31597 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JMW04_RS23880 () | 31597..32763 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| JMW04_RS23885 () | 33351..34106 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| JMW04_RS23890 () | 34880..35686 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| JMW04_RS23895 () | 35687..35992 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JMW04_RS23900 () | 35994..36212 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JMW04_RS23905 () | 36779..37291 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| JMW04_RS23910 () | 37325..38458 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| JMW04_RS23915 () | 38625..39398 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| JMW04_RS23920 () | 39411..39911 | - | 501 | WP_001773886.1 | hypothetical protein | - |
| JMW04_RS23925 () | 40176..40406 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JMW04_RS23930 () | 40403..40819 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JMW04_RS23935 () | 40864..44658 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| JMW04_RS23940 () | 45039..45269 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JMW04_RS23945 () | 45266..45682 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JMW04_RS23950 () | 45757..47322 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| JMW04_RS23955 () | 47307..48329 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| JMW04_RS23960 () | 48583..49280 | - | 698 | Protein_55 | IS1 family transposase | - |
| JMW04_RS23965 () | 49583..50280 | + | 698 | Protein_56 | IS1 family transposase | - |
| JMW04_RS23970 () | 50460..50973 | - | 514 | Protein_57 | DUF4113 domain-containing protein | - |
| JMW04_RS23975 () | 51034..51138 | - | 105 | Protein_58 | AAA family ATPase | - |
| JMW04_RS23980 () | 51140..51463 | - | 324 | Protein_59 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|