MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_LR890405 Location: 4435262..4436242 Organism: Escherichia coli isolate MSB1_7C-sc-2280317 Replicon: chromosome
Accession: NZ_LR890405 Location: 4435262..4436242 Organism: Escherichia coli isolate MSB1_7C-sc-2280317 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JMW09_RS21250 () | 4431760..4432476 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
JMW09_RS21255 () | 4432496..4433602 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
JMW09_RS21260 () | 4433667..4434647 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
JMW09_RS21265 () | 4435262..4436278 | - | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
JMW09_RS21270 () | 4436429..4437669 | - | 1241 | Protein_4165 | DNA helicase | - |
JMW09_RS21275 () | 4437785..4438030 | + | 246 | Protein_4166 | GNAT family N-acetyltransferase | - |
JMW09_RS21280 () | 4438407..4438664 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
JMW09_RS21285 () | 4438676..4439221 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
JMW09_RS21290 () | 4439277..4440023 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
JMW09_RS21295 () | 4440192..4440410 | + | 219 | Protein_4170 | hypothetical protein | - |
JMW09_RS21300 () | 4440448..4440564 | + | 117 | Protein_4171 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |