MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_LR890288 Location: 4125983..4126963 Organism: Escherichia coli isolate MSB1_1A-sc-2280383 Replicon: chromosome
Accession: NZ_LR890288 Location: 4125983..4126963 Organism: Escherichia coli isolate MSB1_1A-sc-2280383 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JMW08_RS19590 () | 4122481..4123197 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
JMW08_RS19595 () | 4123217..4124323 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
JMW08_RS19600 () | 4124388..4125368 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
JMW08_RS19605 () | 4125983..4126999 | - | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
JMW08_RS19610 () | 4127150..4128390 | - | 1241 | Protein_3831 | DNA helicase | - |
JMW08_RS19615 () | 4128506..4128751 | + | 246 | Protein_3832 | GNAT family N-acetyltransferase | - |
JMW08_RS19620 () | 4129128..4129385 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
JMW08_RS19625 () | 4129397..4129942 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
JMW08_RS19630 () | 4129998..4130744 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
JMW08_RS19635 () | 4130913..4131131 | + | 219 | Protein_3836 | hypothetical protein | - |
JMW08_RS19640 () | 4131169..4131285 | + | 117 | Protein_3837 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |