MGE detailed information
MGE type: Conjugative plasmid MGE length: 97083 bp
Accession: NZ_LR882494 Location: 1..97083 Organism: Escherichia coli isolate 2016-17-292 Replicon: plasmid 2
Accession: NZ_LR882494 Location: 1..97083 Organism: Escherichia coli isolate 2016-17-292 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHO92_RS23585 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| IHO92_RS23590 () | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| IHO92_RS23595 () | 2124..2312 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| IHO92_RS23600 () | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| IHO92_RS23605 () | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| IHO92_RS23610 () | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| IHO92_RS23615 () | 7425..7583 | - | 159 | WP_001324039.1 | integrase core domain-containing protein | - |
| IHO92_RS23620 () | 7767..8966 | + | 1200 | Protein_7 | IS3 family transposase IS629 | Transposase |
| IHO92_RS23625 () | 9114..9439 | - | 326 | Protein_8 | DDE-type integrase/transposase/recombinase | - |
| IHO92_RS23630 () | 10420..11607 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| IHO92_RS23635 () | 11604..13544 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| IHO92_RS23640 () | 13548..14918 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| IHO92_RS23645 () | 15392..15586 | + | 195 | Protein_12 | IS200/IS605-like element IS200C family transposase | - |
| IHO92_RS23650 () | 15715..16656 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| IHO92_RS23655 () | 16891..18280 | - | 1390 | Protein_14 | ISNCY family transposase ISKpn21 | Transposase |
| IHO92_RS23660 () | 18590..18739 | - | 150 | Protein_15 | IS3 family transposase | - |
| IHO92_RS23665 () | 18916..20109 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| IHO92_RS23670 () | 21351..22079 | - | 729 | Protein_17 | IS3 family transposase IS2 | Transposase |
| IHO92_RS23675 () | 22141..23303 | + | 1163 | WP_094250033.1 | IS3 family transposase ISEc17 | Transposase |
| IHO92_RS23680 () | 23320..23885 | - | 566 | Protein_19 | IS3 family transposase IS2 | Transposase |
| IHO92_RS23685 () | 24465..24758 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| IHO92_RS23690 () | 24816..25015 | - | 200 | Protein_21 | lysis protein | - |
| IHO92_RS23695 () | 25569..26668 | + | 1100 | Protein_22 | IS481 family transposase ISKpn28 | Transposase |
| IHO92_RS23700 () | 27904..29019 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| IHO92_RS23705 () | 29159..32818 | + | 3660 | WP_001389363.1 | Multidrug efflux ATP-binding/permease protein | VF |
| IHO92_RS23710 () | 32922..34151 | + | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
| IHO92_RS23715 () | 34236..35192 | + | 957 | WP_000271274.1 | hypothetical protein | VF |
| IHO92_RS23720 () | 35237..37414 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| IHO92_RS23725 () | 38121..39349 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| IHO92_RS23730 () | 39616..40650 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| IHO92_RS23735 () | 41210..41518 | - | 309 | WP_000377483.1 | hypothetical protein | - |
| IHO92_RS23740 () | 41617..41799 | - | 183 | WP_000969988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IHO92_RS23745 () | 41796..41993 | - | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
| IHO92_RS23750 () | 42675..43949 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| IHO92_RS23755 () | 43924..46038 | + | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
| IHO92_RS23760 () | 46208..46519 | - | 312 | WP_001259758.1 | colicin V | - |
| IHO92_RS23765 () | 46497..46733 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| IHO92_RS23770 () | 46894..47671 | + | 778 | Protein_37 | Gfo/Idh/MocA family oxidoreductase | - |
| IHO92_RS23775 () | 47673..47942 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| IHO92_RS23780 () | 47939..48205 | + | 267 | WP_001610313.1 | FAD-dependent oxidoreductase | - |
| IHO92_RS23785 () | 48261..48713 | - | 453 | WP_000670963.1 | N-acetyltransferase | - |
| IHO92_RS23790 () | 49006..49266 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| IHO92_RS23795 () | 49263..49853 | + | 591 | WP_001350923.1 | hypothetical protein | - |
| IHO92_RS23800 () | 49873..50130 | - | 258 | WP_000142431.1 | hypothetical protein | - |
| IHO92_RS23805 () | 50259..50594 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| IHO92_RS23810 () | 50616..52496 | - | 1881 | WP_001610315.1 | colicin 1A | - |
| IHO92_RS23815 () | 52682..53530 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| IHO92_RS23820 () | 53576..53857 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IHO92_RS23825 () | 53854..54123 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| IHO92_RS23830 () | 54196..54336 | - | 141 | WP_012512742.1 | hypothetical protein | - |
| IHO92_RS23835 () | 55039..55896 | - | 858 | WP_001610316.1 | incFII family plasmid replication initiator RepA | - |
| IHO92_RS23840 () | 55889..55963 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IHO92_RS23845 () | 56189..56449 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| IHO92_RS23850 () | 56688..57278 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| IHO92_RS23855 () | 57316..57525 | - | 210 | WP_001610317.1 | hemolysin expression modulator Hha | - |
| IHO92_RS23860 () | 57571..58032 | - | 462 | WP_001233868.1 | thermonuclease family protein | - |
| IHO92_RS23865 () | 58232..58483 | - | 252 | WP_001372275.1 | hypothetical protein | - |
| IHO92_RS23870 () | 58615..59175 | - | 561 | WP_001610319.1 | fertility inhibition protein FinO | - |
| IHO92_RS23875 () | 59278..60138 | - | 861 | WP_000704522.1 | Quorum-quenching protein AidA | VF |
| IHO92_RS23880 () | 60197..60943 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| IHO92_RS23885 () | 60963..63182 | - | 2220 | Protein_60 | Multifunctional conjugation protein TraI | Relaxase |
| IHO92_RS23890 () | 63263..63907 | - | 645 | Protein_61 | type IV secretion system DNA-binding domain-containing protein | - |
| IHO92_RS23895 () | 63903..64505 | - | 603 | Protein_62 | conjugal transfer protein TraB | - |
| IHO92_RS23900 () | 64505..65209 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IHO92_RS23905 () | 65220..65786 | - | 567 | WP_112025843.1 | type IV conjugative transfer system protein TraE | - |
| IHO92_RS23910 () | 65808..66119 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IHO92_RS23915 () | 66134..66499 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| IHO92_RS23920 () | 66532..66927 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| IHO92_RS23925 () | 67026..67715 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| IHO92_RS23930 () | 67902..68285 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| IHO92_RS23935 () | 68606..69208 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| IHO92_RS23940 () | 69505..70326 | - | 822 | WP_001234426.1 | DUF945 domain-containing protein | - |
| IHO92_RS23945 () | 70444..70731 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| IHO92_RS23950 () | 71652..71810 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 71854..72078 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 71854..72078 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 71854..72078 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 71854..72078 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| IHO92_RS23955 () | 71890..72078 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| IHO92_RS23960 () | 72090..72809 | - | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| IHO92_RS23965 () | 72806..73240 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| IHO92_RS23970 () | 73295..73492 | - | 198 | Protein_77 | hypothetical protein | - |
| IHO92_RS23975 () | 73520..73753 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| IHO92_RS23980 () | 73821..74360 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| IHO92_RS23985 () | 74386..74592 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| IHO92_RS23990 () | 75731..76702 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IHO92_RS23995 () | 76702..77868 | - | 1167 | WP_001238646.1 | hypothetical protein | VF |
| IHO92_RS24000 () | 78168..78865 | - | 698 | Protein_83 | IS1 family transposase | - |
| IHO92_RS24005 () | 79350..81551 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| IHO92_RS24010 () | 81633..82910 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| IHO92_RS24015 () | 82907..84649 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| IHO92_RS24020 () | 84649..85596 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| IHO92_RS24025 () | 85597..87321 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| IHO92_RS24030 () | 87457..88650 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| IHO92_RS24035 () | 89030..89410 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| IHO92_RS24040 () | 89751..90164 | - | 414 | Protein_91 | phosphopyruvate hydratase | - |
| IHO92_RS24045 () | 90162..90419 | + | 258 | Protein_92 | Tn3 family transposase | - |
| IHO92_RS24050 () | 90653..91510 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| IHO92_RS24055 () | 91507..92364 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| IHO92_RS24060 () | 92361..93188 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| IHO92_RS24065 () | 93188..94102 | - | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| IHO92_RS24070 () | 94458..95155 | + | 698 | Protein_97 | IS1 family transposase | - |
| IHO92_RS24075 () | 95335..95848 | - | 514 | Protein_98 | DUF4113 domain-containing protein | - |
| IHO92_RS24080 () | 95909..96013 | - | 105 | Protein_99 | AAA family ATPase | - |
| IHO92_RS24085 () | 96015..96338 | - | 324 | Protein_100 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|