MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_LR881938 Location: 1396269..1417943 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_LR881938 Location: 1396269..1417943 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEU92_RS06820 () | 1392916..1393947 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| IEU92_RS06825 () | 1394101..1395117 | + | 1017 | WP_010723085.1 | IS5-like element IS5 family transposase | - |
| IEU92_RS06830 () | 1395405..1396217 | - | 813 | Protein_1328 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| IEU92_RS06835 () | 1396269..1397504 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| IEU92_RS06840 () | 1397506..1397721 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| IEU92_RS06845 () | 1397800..1398009 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1397825..1398003 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1397825..1398003 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1397825..1398003 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1397825..1398003 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| IEU92_RS06850 () | 1398002..1398196 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| IEU92_RS06855 () | 1398253..1399062 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| IEU92_RS06860 () | 1399055..1401655 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| IEU92_RS06865 () | 1401757..1402032 | - | 276 | WP_000632297.1 | protein RacC | - |
| IEU92_RS06870 () | 1402107..1402277 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| IEU92_RS06875 () | 1402277..1402498 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| IEU92_RS06880 () | 1402940..1403428 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| IEU92_RS06885 () | 1403425..1403580 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| IEU92_RS06890 () | 1404034..1404510 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| IEU92_RS06895 () | 1404634..1404930 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| IEU92_RS06900 () | 1404953..1405375 | + | 423 | WP_000693797.1 | phage protein | - |
| IEU92_RS06905 () | 1405388..1406245 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| IEU92_RS06910 () | 1406252..1406998 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| IEU92_RS06915 () | 1407021..1407473 | + | 453 | Protein_1345 | DUF1627 domain-containing protein | - |
| IEU92_RS06920 () | 1407669..1407854 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| IEU92_RS06925 () | 1408051..1409508 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| IEU92_RS06930 () | 1409646..1409909 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| IEU92_RS06935 () | 1409890..1410249 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| IEU92_RS06940 () | 1410723..1411655 | + | 933 | Protein_1350 | phage tail length tape measure family protein | - |
| IEU92_RS06945 () | 1411658..1411873 | + | 216 | Protein_1351 | Ail/Lom family outer membrane beta-barrel protein | - |
| IEU92_RS06950 () | 1412015..1412995 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| IEU92_RS06955 () | 1413065..1413253 | + | 189 | Protein_1353 | Ail/Lom family outer membrane beta-barrel protein | - |
| IEU92_RS06960 () | 1413318..1416680 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| IEU92_RS06965 () | 1416680..1417255 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| IEU92_RS06970 () | 1417353..1417943 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IEU92_RS06975 () | 1418260..1418493 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| IEU92_RS06980 () | 1418562..1418675 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| IEU92_RS06985 () | 1419454..1419888 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| IEU92_RS06990 () | 1420029..1421162 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |