MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_LR881938 Location: 1394137..1395117 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_LR881938 Location: 1394137..1395117 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEU92_RS06810 () | 1390016..1390915 | + | 900 | WP_000817708.1 | DNA-binding transcriptional regulator PgrR | - |
| IEU92_RS06815 () | 1391252..1392865 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| IEU92_RS06820 () | 1392916..1393947 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| IEU92_RS06825 () | 1394101..1395117 | + | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| IEU92_RS06830 () | 1395405..1396217 | - | 813 | Protein_1328 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| IEU92_RS06835 () | 1396269..1397504 | - | 1236 | WP_000040852.1 | site-specific integrase | - |
| IEU92_RS06840 () | 1397506..1397721 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| IEU92_RS06845 () | 1397800..1398009 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1397825..1398003 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1397825..1398003 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1397825..1398003 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1397825..1398003 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| IEU92_RS06850 () | 1398002..1398196 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| IEU92_RS06855 () | 1398253..1399062 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0 |