MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 216239 bp
Accession: NZ_LR135244        Location: 1..216239         Organism: Enterococcus faecium isolate E6988       Replicon: plasmid 2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EQB64_RS14130 () 1..1041 + 1041 WP_002326172.1 replication initiator protein A -
EQB64_RS14135 () 1865..2197 + 333 WP_002323647.1 hypothetical protein -
EQB64_RS14140 () 2816..3157 + 342 WP_002295674.1 DUF5406 domain-containing protein -
EQB64_RS14145 () 3394..4644 - 1251 WP_002297404.1 IS110 family transposase ISSpn10 Transposase
EQB64_RS14150 () 5053..7425 + 2373 WP_010733686.1 hypothetical protein -
EQB64_RS14155 () 7486..8946 + 1461 WP_127840762.1 toprim domain-containing protein -
EQB64_RS14160 () 8957..11162 + 2206 Protein_6 DNA topoisomerase III -
EQB64_RS17150 () 11178..11327 + 150 WP_002326517.1 hypothetical protein -
EQB64_RS14165 () 11402..11995 + 594 WP_002296244.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
EQB64_RS14170 () 12008..12907 + 900 WP_010733696.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
EQB64_RS14175 () 12910..13407 + 498 WP_002326885.1 single-stranded DNA-binding protein -
EQB64_RS14180 () 13773..14033 + 261 WP_002296240.1 hypothetical protein -
EQB64_RS14185 () 14478..14684 + 207 WP_002325537.1 hypothetical protein -
EQB64_RS14190 () 14732..14935 + 204 WP_110300627.1 hypothetical protein -
EQB64_RS14195 () 14951..15388 + 438 WP_126341263.1 hypothetical protein -
EQB64_RS14200 () 15381..16088 + 708 WP_002332739.1 hypothetical protein -
EQB64_RS14210 () 16468..16698 + 231 WP_126341264.1 hypothetical protein -
EQB64_RS14215 () 16924..17187 + 264 WP_002287514.1 hypothetical protein Antitoxin Detail
EQB64_RS14220 () 17181..17531 + 351 WP_002321032.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin Detail
EQB64_RS14225 () 17555..18169 - 615 WP_002318230.1 Tn3 family transposase TnpR_TnAs2 Transposase
EQB64_RS14230 () 18483..18905 + 423 WP_002288787.1 hypothetical protein -
EQB64_RS14235 () 18915..19118 + 204 WP_002299573.1 hypothetical protein -
EQB64_RS14240 () 19329..19919 + 591 WP_065305702.1 Tn3 family transposase TnBth3 Transposase
EQB64_RS14245 () 20072..20686 + 615 WP_065305703.1 Tn3 family transposase TnpR_ISPa40 Transposase
EQB64_RS14250 () 20710..21879 + 1170 Protein_24 hypothetical protein -
EQB64_RS14255 () 21871..22830 - 960 WP_002297271.1 IS30 family transposase IS6770 Transposase
EQB64_RS14260 () 22927..23297 - 371 Protein_26 IS3 family transposase IS1485 Transposase
EQB64_RS14265 () 23474..23833 + 360 WP_002342413.1 hypothetical protein -
EQB64_RS14270 () 23885..26263 + 2379 WP_127840763.1 hypothetical protein -
EQB64_RS14275 () 26275..26397 + 123 Protein_29 single-stranded DNA-binding protein -
EQB64_RS14280 () 26545..28191 + 1647 WP_127840764.1 IS1182 family transposase IS663 Transposase
EQB64_RS14285 () 28332..29420 - 1089 WP_002342409.1 hypothetical protein -
EQB64_RS14290 () 29582..30751 + 1170 WP_002300314.1 IS256 family transposase ISEfa13 Transposase
EQB64_RS14295 () 30822..31307 + 486 Protein_33 IS30 family transposase IS1062 Transposase
EQB64_RS14300 () 31317..31553 + 237 Protein_34 UTRA domain-containing protein -
EQB64_RS14305 () 31768..32520 + 753 WP_002350442.1 DeoR/GlpR family DNA-binding transcription regulator -
EQB64_RS14310 () 33113..34570 - 1458 WP_002350440.1 PTS galactitol transporter subunit IIC -
EQB64_RS14315 () 34592..34894 - 303 WP_002350439.1 PTS fructose transporter subunit IIB -
EQB64_RS14320 () 34951..35430 - 480 WP_002350438.1 PTS sugar transporter subunit IIA -
EQB64_RS14325 () 35595..36368 + 774 WP_010731480.1 DeoR/GlpR family DNA-binding transcription regulator -
EQB64_RS14330 () 36388..36816 + 429 WP_049142584.1 galactose-6-phosphate isomerase subunit LacA -
EQB64_RS14335 () 36835..37350 + 516 WP_010731482.1 galactose-6-phosphate isomerase subunit LacB -
EQB64_RS14340 () 37363..38289 + 927 WP_002350433.1 tagatose-6-phosphate kinase -
EQB64_RS14345 () 38302..39288 + 987 WP_127840765.1 tagatose-bisphosphate aldolase -
EQB64_RS14350 () 39744..40412 + 669 WP_002350430.1 Regulator of RpoS VF
EQB64_RS14355 () 40403..41536 + 1134 WP_010731484.1 IS30 family transposase IS1062 Transposase
EQB64_RS14360 () 41561..42682 + 1122 WP_049142558.1 galactonate dehydratase -
EQB64_RS14365 () 42691..43685 + 995 Protein_47 2-dehydro-3-deoxygalactonokinase -
EQB64_RS14370 () 43690..44316 + 627 WP_049142559.1 2-dehydro-3-deoxy-phosphogluconate aldolase -
EQB64_RS14375 () 44710..45717 - 1008 WP_002350449.1 substrate-binding domain-containing protein -
EQB64_RS14380 () 46184..47590 + 1407 WP_016922317.1 6-phospho-beta-galactosidase -
EQB64_RS14385 () 47613..47963 + 351 WP_049142560.1 PTS lactose/cellobiose transporter subunit IIA -
EQB64_RS14390 () 47947..49629 + 1683 WP_010780435.1 PTS lactose transporter subunit IIBC -
EQB64_RS14405 () 51247..52628 + 1382 Protein_54 IS3 family transposase ISLca1 Transposase
EQB64_RS14410 () 52862..53734 - 873 WP_002292418.1 ROK family protein -
EQB64_RS14415 () 53998..55944 - 1947 WP_113795282.1 sucrose-specific PTS transporter subunit IIBC -
EQB64_RS14420 () 56140..57600 + 1461 WP_047936809.1 sucrose-6-phosphate hydrolase -
EQB64_RS14425 () 57581..58543 + 963 WP_047936808.1 LacI family DNA-binding transcriptional regulator -
EQB64_RS14430 () 58848..59207 - 360 Protein_59 IS3 family transposase ISEfa10 Transposase
EQB64_RS14435 () 59622..60575 + 954 WP_002325884.1 IS30 family transposase IS1252 Transposase
EQB64_RS14440 () 60789..62114 + 1326 WP_047936669.1 Y-family DNA polymerase -
EQB64_RS14445 () 62107..62457 + 351 WP_002290348.1 hypothetical protein -
EQB64_RS14450 () 62598..63107 + 510 WP_002295345.1 hypothetical protein -
EQB64_RS14460 () 64497..65582 + 1086 WP_002301591.1 tyrosine recombinase XerS -
EQB64_RS14465 () 65690..66643 - 954 WP_000222572.1 IS30 family transposase IS1252 Transposase
EQB64_RS14470 () 66774..68024 - 1251 WP_002301126.1 PTS sugar transporter subunit IIC -
EQB64_RS14475 () 68043..68969 - 927 WP_002298736.1 PEP phosphonomutase -
EQB64_RS14480 () 69048..70043 - 996 WP_002301128.1 tagatose-bisphosphate aldolase -
EQB64_RS14485 () 70059..71228 - 1170 WP_002301130.1 SIS domain-containing protein -
EQB64_RS14490 () 71244..71978 - 735 WP_002301131.1 GntR family transcriptional regulator -
EQB64_RS14495 () 72122..73396 - 1275 WP_002398627.1 ISL3 family transposase IS1476 Transposase
EQB64_RS14505 () 75989..77281 - 1293 WP_002301811.1 IS256 family transposase ISBsu2 Transposase
EQB64_RS14510 () 77555..77815 - 261 WP_002313174.1 hypothetical protein -
EQB64_RS14515 () 78066..79244 + 1179 WP_002346943.1 IS256 family transposase ISEf1 Transposase
EQB64_RS14520 () 79596..79892 + 297 WP_073120200.1 IS3 family transposase ISEfa8 Transposase
EQB64_RS14525 () 79815..80639 - 825 Protein_77 IS3 family transposase ISEfa8 Transposase
EQB64_RS14530 () 80841..81236 - 396 WP_002287876.1 aspartate 1-decarboxylase -
EQB64_RS14535 () 81246..82094 - 849 WP_002287875.1 pantoate--beta-alanine ligase -
EQB64_RS14540 () 82109..82936 - 828 WP_002287874.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
EQB64_RS14545 () 82948..83808 - 861 WP_002349114.1 Rossmann-like and DUF2520 domain-containing protein -
EQB64_RS14550 () 84007..84201 + 195 WP_002285758.1 hypothetical protein -
EQB64_RS14555 () 84191..84544 + 354 WP_002287659.1 IS66 family transposase ISDeal1 Transposase
EQB64_RS14560 () 84646..86193 + 1548 WP_002296127.1 IS66 family transposase ISRob1 Transposase
EQB64_RS14565 () 86399..87568 + 1170 WP_002300493.1 IS256 family transposase ISEfa13 Transposase
EQB64_RS14570 () 87908..88588 - 681 WP_001015311.1 IS6 family transposase IS1216E Transposase
EQB64_RS14575 () 89218..90390 + 1173 WP_000195429.1 IS256 family transposase IS256 Transposase
EQB64_RS14580 () 90520..91959 - 1440 WP_001028141.1 hypothetical protein ARG
EQB64_RS14585 () 91960..92352 - 393 WP_025189010.1 GNAT family N-acetyltransferase -
EQB64_RS14590 () 92336..93571 - 1236 Protein_90 hypothetical protein ARG
EQB64_RS14595 () 93626..93802 - 177 Protein_91 IS6 family transposase -
EQB64_RS14600 () 93962..94999 - 1038 WP_002303110.1 IS3 family transposase ISSde10 Transposase
EQB64_RS14605 () 94996..95508 - 513 WP_002303111.1 IS3 family transposase ISPa31 Transposase
EQB64_RS14610 () 95578..95832 - 255 Protein_94 replication initiation protein -
EQB64_RS14615 () 96508..97059 - 552 WP_002303113.1 DUF334 domain-containing protein -
EQB64_RS14620 () 97154..97534 - 381 Protein_96 IS6 family transposase IS1216V Transposase
EQB64_RS14630 () 97604..98284 + 681 WP_002319817.1 IS6 family transposase IS1297 Transposase
EQB64_RS14635 () 98312..98875 + 564 WP_002304893.1 Tn3 family transposase TnpR_ISPa40 Transposase
EQB64_RS14640 () 98920..99087 - 168 WP_000824191.1 hypothetical protein -
EQB64_RS14645 () 99121..99420 - 300 WP_000366408.1 BRCT domain-containing protein -
EQB64_RS14650 () 99461..100078 - 618 WP_001224538.1 Tn3 family transposase TnpR_TnAs2 Transposase
EQB64_RS14655 () 100436..101776 + 1341 WP_002303667.1 ISL3 family transposase IS1251 Transposase
EQB64_RS14660 () 101945..102340 - 396 WP_002304891.1 hypothetical protein -
EQB64_RS14665 () 102420..104771 - 2352 WP_000344083.1 DUF1906 domain-containing protein -
EQB64_RS14670 () 104896..105585 - 690 WP_000718009.1 hypothetical protein -
EQB64_RS14675 () 105599..106051 - 453 WP_000751236.1 hypothetical protein -
EQB64_RS14680 () 106160..107338 + 1179 WP_000997695.1 IS256 family transposase ISEf1 Transposase
EQB64_RS14685 () 107528..108208 + 681 WP_002325565.1 IS6 family transposase IS1216E Transposase
EQB64_RS14690 () 108310..109629 - 1320 WP_002300494.1 HAMP domain-containing histidine kinase -
EQB64_RS14695 () 109626..110279 - 654 WP_002285815.1 Regulator of RpoS VF
EQB64_RS14705 () 110567..111841 + 1275 WP_010729615.1 ISL3 family transposase IS1476 Transposase
EQB64_RS14710 () 111896..113461 + 1566 WP_032494987.1 glutamine-hydrolyzing GMP synthase -
EQB64_RS14715 () 113821..114753 - 933 WP_002288609.1 hypothetical protein -
EQB64_RS14720 () 114793..116454 - 1662 WP_002347193.1 O-GlcNAcase NagJ VF
EQB64_RS14725 () 116451..119432 - 2982 WP_002305865.1 glycoside hydrolase family 42 -
EQB64_RS14730 () 119560..121473 - 1914 WP_002304880.1 beta-N-acetylhexosaminidase -
EQB64_RS14735 () 121503..122114 - 612 WP_002304878.1 DUF624 domain-containing protein -
EQB64_RS14740 () 122166..123638 - 1473 WP_002304876.1 extracellular solute-binding protein -
EQB64_RS14745 () 123662..124573 - 912 WP_002289655.1 carbohydrate ABC transporter permease -
EQB64_RS14750 () 124585..125523 - 939 WP_002304874.1 sugar ABC transporter permease -
EQB64_RS14755 () 125752..127326 + 1575 WP_002340467.1 histidine kinase -
EQB64_RS14760 () 127304..128032 + 729 WP_002302980.1 helix-turn-helix domain-containing protein -
EQB64_RS14765 () 128415..129689 - 1275 WP_127840757.1 ISL3 family transposase IS1476 Transposase
EQB64_RS14770 () 129890..131104 + 1215 Protein_124 ISL3 family transposase ISEfa11 Transposase
EQB64_RS14775 () 131320..132315 - 996 WP_002303558.1 CehA/McbA family metallohydrolase -
EQB64_RS14780 () 132296..132790 - 495 WP_002303557.1 hypothetical protein -
EQB64_RS14785 () 132827..133741 - 915 WP_002347190.1 ABC transporter permease -
EQB64_RS14790 () 133738..134904 - 1167 WP_002303555.1 extracellular solute-binding protein -
EQB64_RS14795 () 134901..135878 - 978 WP_002303554.1 Spermidine/putrescine import ATP-binding protein PotA VF
EQB64_RS14800 () 135894..136733 - 840 WP_002303553.1 ABC transporter permease subunit -
EQB64_RS14805 () 136696..137379 - 684 WP_002303552.1 glycerophosphodiester phosphodiesterase -
EQB64_RS17155 () 137679..137837 - 159 WP_157749794.1 hypothetical protein -
EQB64_RS14810 () 137856..139334 - 1479 WP_002347189.1 IS1182 family transposase ISEfa7 Transposase
EQB64_RS14815 () 139435..140559 - 1125 WP_002303223.1 IS256 family transposase ISBsu2 Transposase
EQB64_RS14820 () 140689..142065 - 1377 WP_002298085.1 ABC transporter permease -
EQB64_RS14825 () 142065..142721 - 657 WP_002298083.1 putative ABC transporter ATP-binding protein VF
EQB64_RS14830 () 142731..144008 - 1278 WP_002301194.1 ABC transporter permease -
EQB64_RS14835 () 144027..144182 - 156 Protein_138 4Fe-4S binding protein -
EQB64_RS14840 () 144258..145420 + 1163 WP_127840767.1 IS3 family transposase ISEfa8 Transposase
EQB64_RS14845 () 145450..145899 - 450 WP_127840768.1 TlpA family protein disulfide reductase -
EQB64_RS17160 () 146055..146597 - 543 WP_002298088.1 hypothetical protein -
EQB64_RS14860 () 146872..148034 + 1163 WP_127840753.1 IS3 family transposase ISEfa8 Transposase
EQB64_RS14870 () 148150..148479 + 330 WP_002347187.1 hypothetical protein -
EQB64_RS14875 () 148479..148868 + 390 WP_002326577.1 hypothetical protein -
EQB64_RS17165 () 149201..149338 - 138 WP_002295556.1 hypothetical protein -
EQB64_RS14880 () 149631..150557 - 927 WP_002295554.1 ribokinase -
EQB64_RS14885 () 150571..151230 - 660 WP_002303572.1 Ribulose-phosphate 3-epimerase VF
EQB64_RS14890 () 151223..152236 - 1014 WP_002303571.1 LacI family transcriptional regulator -
EQB64_RS14895 () 152417..153853 + 1437 WP_002295548.1 PTS glucitol transporter subunit IIA -
EQB64_RS14900 () 154196..155358 + 1163 WP_098388095.1 IS3 family transposase ISEfa8 Transposase
EQB64_RS14910 () 155464..155679 + 216 Protein_151 IS256 family transposase ISEf1 Transposase
EQB64_RS14915 () 155970..156175 - 206 Protein_152 hypothetical protein -
EQB64_RS14920 () 156611..156805 + 195 WP_002285758.1 hypothetical protein -
EQB64_RS14925 () 156795..157148 + 354 WP_002287659.1 IS66 family transposase ISDeal1 Transposase
EQB64_RS14930 () 157250..158797 + 1548 WP_002296127.1 IS66 family transposase ISRob1 Transposase
EQB64_RS14935 () 158874..159716 + 843 Protein_156 IS982 family transposase ISEfm1 Transposase
EQB64_RS17170 () 159736..160200 - 465 Protein_157 hypothetical protein -
EQB64_RS14945 () 160440..161588 - 1149 WP_002330559.1 IS200-IS605 family transposase ISEfa4 Transposase
EQB64_RS14950 () 161605..162009 - 405 WP_002287522.1 IS200-IS605 family transposase ISEfa4 Transposase
EQB64_RS14960 () 162345..162899 - 555 WP_002303574.1 tyrosine-type recombinase/integrase -
EQB64_RS14965 () 163642..164202 + 561 WP_002347210.1 hypothetical protein -
EQB64_RS14970 () 164235..165047 - 813 WP_002322679.1 AAA family ATPase -
EQB64_RS14975 () 165040..166476 - 1437 WP_002322678.1 DDE-type integrase/transposase/recombinase -
EQB64_RS14980 () 166448..167041 - 594 WP_002322677.1 Tn3 family transposase TnBth3 Transposase
EQB64_RS14985 () 167273..167503 + 231 WP_002322676.1 hypothetical protein Antitoxin Detail
EQB64_RS14990 () 167503..167844 + 342 WP_002322675.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin Detail
EQB64_RS14995 () 168058..169560 - 1503 WP_002322674.1 xylulokinase -
EQB64_RS15000 () 169633..170685 - 1053 WP_002323515.1 sugar ABC transporter substrate-binding protein -
EQB64_RS15005 () 170738..171706 - 969 WP_002322672.1 ABC transporter permease -
EQB64_RS15010 () 171771..173279 - 1509 WP_002322671.1 sugar ABC transporter ATP-binding protein -
EQB64_RS15015 () 173329..174939 - 1611 WP_002322670.1 glycoside hydrolase family 43 protein -
EQB64_RS15020 () 175039..176346 - 1308 WP_002322669.1 xylose isomerase -
EQB64_RS15025 () 176633..177787 + 1155 WP_002323041.1 ROK family transcriptional regulator -
EQB64_RS15030 () 178313..178558 + 246 WP_002323040.1 hypothetical protein -
EQB64_RS15035 () 178555..179052 - 498 WP_002316138.1 Spermidine/spermine N(1)-acetyltransferase VF
EQB64_RS15040 () 179108..180016 - 909 WP_002295743.1 IS982 family transposase ISEfm1 Transposase
EQB64_RS15050 () 180777..181964 + 1188 WP_002296840.1 IS256 family transposase IS16 Transposase
EQB64_RS15055 () 182297..182977 - 681 WP_002347368.1 IS6 family transposase ISS1W Transposase
EQB64_RS15060 () 183175..185079 - 1905 WP_002322690.1 heavy metal translocating P-type ATPase -
EQB64_RS15065 () 185277..185510 - 234 WP_002301447.1 cation transporter -
EQB64_RS15070 () 185657..186511 - 855 WP_002322689.1 prolipoprotein diacylglyceryl transferase -
EQB64_RS15075 () 186496..186834 - 339 WP_002300938.1 hypothetical protein -
EQB64_RS15080 () 187062..187766 - 705 WP_002292156.1 Crp/Fnr family transcriptional regulator -
EQB64_RS17175 () 187781..187921 - 141 WP_002293765.1 hypothetical protein -
EQB64_RS15085 () 187911..188483 - 573 WP_002292150.1 DNA protection during starvation protein VF
EQB64_RS15090 () 188894..189298 - 405 Protein_186 IS982 family transposase ISEfm1 Transposase
EQB64_RS15095 () 189487..190782 + 1296 WP_002297185.1 ISL3 family transposase ISEfa5 Transposase
EQB64_RS15100 () 190904..192196 + 1293 WP_002298232.1 ISL3 family transposase IS1251 Transposase
EQB64_RS15105 () 192408..193250 - 843 WP_002289586.1 PRD domain-containing protein -
EQB64_RS15110 () 193287..194753 - 1467 WP_002289584.1 glycoside hydrolase family 1 protein -
EQB64_RS15115 () 194809..196653 - 1845 WP_002298230.1 beta-glucoside-specific PTS transporter subunit IIABC -
EQB64_RS15120 () 197255..198205 + 951 WP_002300609.1 Transcriptional regulatory protein DagR VF
EQB64_RS15125 () 198250..198883 - 634 Protein_193 peptidase -
EQB64_RS15130 () 199143..199691 - 549 WP_002292681.1 hypothetical protein -
EQB64_RS15135 () 199692..200549 - 858 WP_002292680.1 AAA family ATPase -
EQB64_RS15140 () 200722..201900 - 1179 WP_002324322.1 IS256 family transposase ISEfm2 Transposase
EQB64_RS15145 () 202168..202455 - 288 WP_002300557.1 type II toxin-antitoxin system RelE/ParE family toxin -
EQB64_RS15150 () 202445..202774 - 330 WP_002292678.1 AbrB family transcriptional regulator -
EQB64_RS15155 () 202851..203123 - 273 WP_002314366.1 Txe/YoeB family addiction module toxin Toxin Detail
EQB64_RS15160 () 203123..203386 - 264 WP_002297422.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
EQB64_RS15165 () 203620..204528 + 909 Protein_201 IS982 family transposase ISEfm1 Transposase
EQB64_RS15170 () 204531..205706 - 1176 WP_002336205.1 MFS transporter -
EQB64_RS15175 () 205709..207958 - 2250 WP_002314387.1 alpha-galactosidase -
EQB64_RS15180 () 208055..208909 - 855 WP_002338109.1 AraC family transcriptional regulator -
EQB64_RS15185 () 208991..209899 - 909 Protein_205 IS982 family transposase ISEfm1 Transposase
EQB64_RS15190 () 209993..210928 - 936 WP_002323400.1 hypothetical protein -
EQB64_RS15195 () 211487..211804 - 318 WP_002290394.1 type II toxin-antitoxin system RelE/ParE family toxin -
EQB64_RS15200 () 211805..212059 - 255 WP_002323399.1 hypothetical protein -
EQB64_RS15205 () 212418..212822 + 405 WP_002287522.1 IS200-IS605 family transposase ISEfa4 Transposase
EQB64_RS15210 () 212839..213987 + 1149 WP_002287525.1 IS200-IS605 family transposase ISEfa4 Transposase
EQB64_RS15215 () 214210..214428 - 219 Protein_211 type II toxin-antitoxin system RelE/ParE family toxin -
EQB64_RS15220 () 214694..214888 - 195 WP_002348857.1 hypothetical protein -
EQB64_RS15225 () 214988..215074 - 87 Protein_213 single-stranded DNA-binding protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance