MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94720 bp
Accession: NZ_LR025102 Location: 1..94720 Organism: Escherichia coli isolate EC-1639 Replicon: plasmid 2
Accession: NZ_LR025102 Location: 1..94720 Organism: Escherichia coli isolate EC-1639 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC1639_RS24430 () | 242..1375 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| EC1639_RS25980 () | 1542..2314 | - | 773 | Protein_2 | hypothetical protein | - |
| EC1639_RS24445 () | 2343..2828 | - | 486 | WP_001403958.1 | hypothetical protein | - |
| EC1639_RS24450 () | 3219..5840 | + | 2622 | WP_001586230.1 | hypothetical protein | - |
| EC1639_RS24455 () | 6039..6269 | + | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EC1639_RS24460 () | 6358..6633 | + | 276 | WP_001403920.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EC1639_RS24465 () | 6638..6855 | - | 218 | Protein_7 | transposase | - |
| EC1639_RS24470 () | 6856..7386 | - | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EC1639_RS24475 () | 7390..7659 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EC1639_RS24480 () | 8547..9536 | + | 990 | WP_123002471.1 | RepB family plasmid replication initiator protein | - |
| EC1639_RS24485 () | 9859..10599 | - | 741 | WP_001586233.1 | tyrosine-type recombinase/integrase | - |
| EC1639_RS24490 () | 10720..10902 | - | 183 | WP_042004909.1 | hypothetical protein | - |
| EC1639_RS24500 () | 11245..11552 | - | 308 | Protein_13 | type II toxin-antitoxin system ParD family antitoxin | - |
| EC1639_RS24505 () | 11811..12508 | + | 698 | Protein_14 | IS1 family transposase IS1R | Transposase |
| EC1639_RS24510 () | 12525..13442 | - | 918 | Protein_15 | IS4 family transposase IS10R | Transposase |
| EC1639_RS24515 () | 13496..14200 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EC1639_RS24520 () | 14271..15284 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| EC1639_RS24525 () | 15442..15915 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| EC1639_RS24530 () | 16046..16834 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| EC1639_RS24535 () | 17040..17387 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| EC1639_RS24540 () | 17381..18220 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| EC1639_RS24550 () | 18348..18551 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| EC1639_RS24555 () | 18707..19912 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| EC1639_RS24560 () | 19923..20228 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| EC1639_RS25985 () | 20272..20337 | + | 66 | Protein_25 | EAL domain-containing protein | - |
| EC1639_RS24570 () | 20455..21219 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| EC1639_RS24585 () | 21712..22296 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| EC1639_RS24590 () | 22296..23534 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| EC1639_RS24595 () | 23531..24436 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| EC1639_RS24605 () | 24558..25262 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EC1639_RS24610 () | 25324..25458 | - | 135 | Protein_31 | IS4 family transposase | - |
| EC1639_RS24615 () | 25473..26170 | - | 698 | Protein_32 | IS1 family transposase IS1X2 | Transposase |
| EC1639_RS24630 () | 26633..26791 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| EC1639_RS24635 () | 26781..27287 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| EC1639_RS24640 () | 27470..28285 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| EC1639_RS24650 () | 28632..30518 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| EC1639_RS24655 () | 30559..31086 | + | 528 | WP_000178050.1 | iron transporter | - |
| EC1639_RS24660 () | 31190..32569 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| EC1639_RS24665 () | 32572..33855 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| EC1639_RS24670 () | 33845..34975 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| EC1639_RS24675 () | 34980..35675 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| EC1639_RS24680 () | 35662..36147 | + | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| EC1639_RS24685 () | 36172..36657 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| EC1639_RS24690 () | 36779..37309 | + | 531 | Protein_44 | histidine-type phosphatase | - |
| EC1639_RS24695 () | 37367..38071 | - | 705 | WP_001541960.1 | IS6 family transposase IS26 | Transposase |
| EC1639_RS24700 () | 38096..39292 | + | 1197 | Protein_46 | IS3 family transposase | - |
| EC1639_RS24705 () | 39314..39547 | + | 234 | Protein_47 | Tn3 family transposase ISPsy39 | Transposase |
| EC1639_RS24710 () | 39624..39932 | + | 309 | Protein_48 | IS4 family transposase ISEc13 | Transposase |
| EC1639_RS24715 () | 39991..41301 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| EC1639_RS24720 () | 41294..42367 | - | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| EC1639_RS24725 () | 42373..43197 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| EC1639_RS24730 () | 43208..44095 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| EC1639_RS24735 () | 44085..44963 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| EC1639_RS24740 () | 45094..45534 | - | 441 | Protein_54 | zinc-binding dehydrogenase | - |
| EC1639_RS24750 () | 45935..46825 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| EC1639_RS24755 () | 46850..47230 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| EC1639_RS24760 () | 47263..48228 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| EC1639_RS24765 () | 48274..49026 | - | 753 | WP_134051825.1 | IclR family transcriptional regulator | - |
| EC1639_RS24770 () | 49631..49915 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EC1639_RS24775 () | 49915..50190 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EC1639_RS24780 () | 50253..50950 | - | 698 | Protein_61 | IS1 family transposase IS1R | Transposase |
| EC1639_RS24795 () | 51295..51999 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EC1639_RS24800 () | 52063..52401 | + | 339 | Protein_63 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EC1639_RS24805 () | 52584..53444 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| EC1639_RS24810 () | 53591..53872 | + | 282 | Protein_65 | transposase zinc-binding domain-containing protein | - |
| EC1639_RS24820 () | 54042..54746 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EC1639_RS24830 () | 54796..55515 | + | 720 | Protein_67 | AAA family ATPase | - |
| EC1639_RS24835 () | 55502..56353 | + | 852 | WP_000240536.1 | replication protein | - |
| EC1639_RS24845 () | 56661..57476 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| EC1639_RS24850 () | 57537..58340 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| EC1639_RS24855 () | 58340..59176 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| EC1639_RS24860 () | 59237..59941 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EC1639_RS24865 () | 60006..61256 | - | 1251 | Protein_73 | transposase | - |
| EC1639_RS24875 () | 61331..61999 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| EC1639_RS24880 () | 62035..62271 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| EC1639_RS24885 () | 62268..62630 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| EC1639_RS24890 () | 62648..64342 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| EC1639_RS24895 () | 64394..64816 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| EC1639_RS24900 () | 64852..65127 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| EC1639_RS24905 () | 65141..65491 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| EC1639_RS24910 () | 65563..65997 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| EC1639_RS24915 () | 66104..66801 | - | 698 | Protein_82 | IS1 family transposase IS1R | Transposase |
| EC1639_RS24920 () | 67050..67451 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| EC1639_RS24925 () | 67384..67641 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| EC1639_RS24930 () | 67734..68387 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| EC1639_RS24945 () | 69601..69813 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| EC1639_RS24950 () | 69944..70306 | - | 363 | Protein_87 | fertility inhibition protein FinO | - |
| EC1639_RS24955 () | 70302..73553 | - | 3252 | Protein_88 | Multifunctional conjugation protein TraI | Relaxase |
| EC1639_RS24960 () | 73553..75280 | - | 1728 | WP_134051828.1 | type IV conjugative transfer system coupling protein TraD | - |
| EC1639_RS24965 () | 75264..76874 | - | 1611 | Protein_90 | conjugal transfer mating pair stabilization protein TraG | - |
| EC1639_RS26085 () | 76922..77012 | - | 91 | Protein_91 | conjugal transfer protein TraB | - |
| EC1639_RS24975 () | 77008..77460 | - | 453 | Protein_92 | DNA methylase | - |
| EC1639_RS24980 () | 77537..77841 | - | 305 | Protein_93 | hypothetical protein | - |
| EC1639_RS24985 () | 77845..78747 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| EC1639_RS25000 () | 79614..80585 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EC1639_RS25005 () | 80585..81751 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| EC1639_RS25010 () | 82339..83094 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| EC1639_RS25015 () | 83868..84674 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| EC1639_RS25020 () | 84675..84980 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EC1639_RS25025 () | 84982..85200 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EC1639_RS25030 () | 85908..86903 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| EC1639_RS25035 () | 86907..87839 | + | 933 | WP_000991831.1 | hypothetical protein | - |
| EC1639_RS25040 () | 88132..88317 | + | 186 | WP_001586223.1 | hypothetical protein | - |
| EC1639_RS25045 () | 88318..89220 | + | 903 | WP_024187432.1 | hypothetical protein | - |
| EC1639_RS25050 () | 89222..89956 | + | 735 | Protein_105 | hypothetical protein | - |
| EC1639_RS25055 () | 90023..90778 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| EC1639_RS25060 () | 90775..92274 | - | 1500 | WP_000174402.1 | IS21 family transposase ISEc10 | Transposase |
| EC1639_RS25065 () | 92564..94129 | - | 1566 | WP_001586226.1 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|