MGE detailed information
MGE type: Prophage MGE length: 53754 bp
Accession: NZ_LN680001 Location: 2663501..2717254 Organism: Bacillus subtilis strain BS34A Replicon: chromosome
Accession: NZ_LN680001 Location: 2663501..2717254 Organism: Bacillus subtilis strain BS34A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VV28_RS13290 () | 2658524..2659141 | - | 618 | WP_004398514.1 | competence protein ComEA | - |
| VV28_RS13295 () | 2659225..2660046 | + | 822 | WP_004398597.1 | late competence protein ComER | - |
| VV28_RS13300 () | 2660112..2660855 | - | 744 | WP_003229973.1 | methyltransferase domain-containing protein | - |
| VV28_RS13305 () | 2660852..2661208 | - | 357 | WP_003229971.1 | ribosome silencing factor | - |
| VV28_RS13310 () | 2661226..2661786 | - | 561 | WP_004399059.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| VV28_RS13315 () | 2661776..2662345 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| VV28_RS13320 () | 2662357..2662647 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| VV28_RS13325 () | 2662641..2663483 | - | 843 | WP_003229967.1 | shikimate dehydrogenase | - |
| VV28_RS13330 () | 2663501..2664601 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| VV28_RS13335 () | 2664605..2665123 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| VV28_RS13340 () | 2665485..2665625 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| VV28_RS13345 () | 2665931..2666662 | - | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| VV28_RS13350 () | 2666914..2667666 | - | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| VV28_RS13355 () | 2667853..2668479 | + | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| VV28_RS13360 () | 2668498..2669391 | - | 894 | WP_003229961.1 | 2-hydroxy-3-oxopropionate reductase | VF |
| VV28_RS13365 () | 2669643..2670365 | + | 723 | WP_010886572.1 | hypothetical protein | - |
| VV28_RS13370 () | 2670398..2670808 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| VV28_RS13375 () | 2671004..2671351 | + | 348 | Protein_2714 | sigma-70 family RNA polymerase sigma factor | - |
| VV28_RS13380 () | 2671382..2672884 | - | 1503 | WP_010886573.1 | hypothetical protein ; Integrase | Integrase |
| VV28_RS13385 () | 2673333..2673752 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| VV28_RS13390 () | 2673764..2674804 | - | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| VV28_RS13395 () | 2674827..2675267 | - | 441 | WP_003229954.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| VV28_RS13400 () | 2675328..2675645 | - | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| VV28_RS13405 () | 2676017..2676781 | - | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| VV28_RS13410 () | 2677224..2678351 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| VV28_RS13415 () | 2678341..2678475 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| VV28_RS21875 () | 2678585..2678743 | + | 159 | WP_003245945.1 | hypothetical protein | - |
| VV28_RS13420 () | 2679113..2680708 | + | 1596 | WP_004399034.1 | type II toxin-antitoxin system toxin ribonuclease YqcG | - |
| VV28_RS13425 () | 2680723..2681301 | + | 579 | WP_009967790.1 | type II toxin-antitoxin system antitoxin YqcF | - |
| VV28_RS22480 () | 2681419..2681565 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| VV28_RS13430 () | 2681562..2681924 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| VV28_RS13435 () | 2681940..2682419 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| VV28_RS13440 () | 2682584..2683402 | - | 819 | WP_003229946.1 | hypothetical protein | VF |
| VV28_RS13445 () | 2683447..2683869 | - | 423 | WP_003246208.1 | holin family protein | - |
| VV28_RS13450 () | 2683914..2684807 | - | 894 | WP_003246010.1 | hypothetical protein | - |
| VV28_RS13455 () | 2684895..2685059 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| VV28_RS13460 () | 2685056..2685391 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| VV28_RS13465 () | 2685401..2686501 | - | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| VV28_RS13470 () | 2686504..2686776 | - | 273 | WP_003229942.1 | hypothetical protein | - |
| VV28_RS13475 () | 2686773..2687351 | - | 579 | WP_003229941.1 | YmfQ family protein | - |
| VV28_RS13480 () | 2687335..2688381 | - | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| VV28_RS13485 () | 2688374..2688799 | - | 426 | WP_045147880.1 | DUF2634 domain-containing protein | - |
| VV28_RS13490 () | 2688812..2689075 | - | 264 | WP_003229938.1 | DUF2577 family protein | - |
| VV28_RS13495 () | 2689072..2690052 | - | 981 | WP_004398524.1 | hypothetical protein | - |
| VV28_RS13500 () | 2690065..2690724 | - | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| VV28_RS13505 () | 2690717..2695474 | - | 4758 | WP_003246092.1 | transglycosylase SLT domain-containing protein | - |
| VV28_RS21880 () | 2695477..2695614 | - | 138 | WP_003229934.1 | hypothetical protein | - |
| VV28_RS13510 () | 2695656..2696105 | - | 450 | WP_003229933.1 | phage portal protein | - |
| VV28_RS13515 () | 2696251..2696430 | + | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - () | 2696354..2696576 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2696354..2696576 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2696354..2696576 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2696354..2696576 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| VV28_RS22485 () | 2696810..2696899 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| VV28_RS13520 () | 2697153..2697596 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| VV28_RS13525 () | 2697599..2698999 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| VV28_RS13530 () | 2699000..2699191 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| VV28_RS13535 () | 2699188..2699625 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| VV28_RS13540 () | 2699638..2700141 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| VV28_RS13545 () | 2700138..2700500 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| VV28_RS13550 () | 2700497..2700892 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| VV28_RS13555 () | 2700896..2701207 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| VV28_RS13560 () | 2701218..2702153 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| VV28_RS13565 () | 2702172..2703140 | - | 969 | WP_003229921.1 | phage portal protein | - |
| VV28_RS13570 () | 2703173..2703826 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| VV28_RS13575 () | 2703867..2704784 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| VV28_RS13580 () | 2704781..2706313 | - | 1533 | WP_004398894.1 | phage portal protein | - |
| VV28_RS13585 () | 2706317..2707612 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| VV28_RS13590 () | 2707605..2708324 | - | 720 | WP_003229916.1 | hypothetical protein | - |
| VV28_RS13595 () | 2708392..2708856 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| VV28_RS13600 () | 2709000..2709455 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| VV28_RS13605 () | 2709653..2710582 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| VV28_RS13610 () | 2710656..2710862 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| VV28_RS13615 () | 2710944..2711372 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| VV28_RS21890 () | 2711468..2711617 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| VV28_RS13620 () | 2711608..2712549 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| VV28_RS13625 () | 2712431..2713108 | - | 678 | WP_010886575.1 | DNA-binding protein | - |
| VV28_RS13630 () | 2713184..2714038 | - | 855 | WP_003229907.1 | recombinase RecT | - |
| VV28_RS13635 () | 2714041..2715000 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| VV28_RS13640 () | 2715106..2715300 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| VV28_RS22490 () | 2715260..2715433 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| VV28_RS13645 () | 2715430..2715687 | - | 258 | WP_003245994.1 | hypothetical protein | - |
| VV28_RS13650 () | 2715684..2716253 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| VV28_RS21895 () | 2716327..2716467 | - | 141 | WP_003229902.1 | hypothetical protein | - |
| VV28_RS13655 () | 2716497..2716727 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| VV28_RS13660 () | 2716904..2717254 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| VV28_RS21900 () | 2717521..2717688 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| VV28_RS13665 () | 2718044..2718580 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| VV28_RS13670 () | 2718849..2719367 | + | 519 | WP_004399097.1 | ImmA/IrrE family metallo-endopeptidase | - |
| VV28_RS13675 () | 2719373..2719765 | + | 393 | Protein_2782 | sigma-70 family RNA polymerase sigma factor | - |
| VV28_RS22495 () | 2719765..2719881 | + | 117 | WP_003229898.1 | hypothetical protein | - |
| VV28_RS21905 () | 2719847..2720047 | - | 201 | Protein_2784 | recombinase family protein | - |
| VV28_RS21910 () | 2719990..2720154 | - | 165 | WP_010886576.1 | hypothetical protein | - |
| VV28_RS13680 () | 2720699..2721115 | - | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | Prophage | TA6322, TA10201, TA20260 | NC_000964 | 2645490..2699243 | 0 |