MGE detailed information
MGE type: Conjugative plasmid MGE length: 101492 bp
Accession: NZ_CP128262 Location: 1..101492 Organism: Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B Replicon: plasmid pIncI1-ST12
Accession: NZ_CP128262 Location: 1..101492 Organism: Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B Replicon: plasmid pIncI1-ST12
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QR684_RS23075 (46) | 46..1077 | + | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| QR684_RS23080 (1986) | 1986..2255 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QR684_RS23085 (2255) | 2255..2533 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QR684_RS23090 (2573) | 2573..3421 | + | 849 | WP_001057991.1 | 3'-5' exonuclease | - |
| QR684_RS23095 (3538) | 3538..4011 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| QR684_RS23100 (4488) | 4488..4754 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| QR684_RS23105 (4754) | 4754..5248 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| QR684_RS23110 (5304) | 5304..5906 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QR684_RS23115 (6260) | 6260..7144 | + | 885 | Protein_8 | protein YagA | - |
| QR684_RS23120 (7327) | 7327..8589 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| QR684_RS23125 (8913) | 8913..10058 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| QR684_RS23130 (10152) | 10152..10685 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| QR684_RS23135 (10682) | 10682..10999 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| QR684_RS23140 (11051) | 11051..11521 | + | 471 | Protein_13 | protein YagA | - |
| QR684_RS23145 (11800) | 11800..13680 | + | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QR684_RS23150 (13698) | 13698..14045 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| QR684_RS23155 (14164) | 14164..14511 | + | 348 | WP_000142436.1 | DUF6404 family protein | - |
| QR684_RS23160 (14529) | 14529..15119 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| QR684_RS23165 (15119) | 15119..15373 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| QR684_RS23170 (15725) | 15725..16726 | + | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| QR684_RS23175 (16902) | 16902..17246 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| QR684_RS23180 (17745) | 17745..17999 | - | 255 | WP_046340923.1 | hypothetical protein | - |
| QR684_RS23185 (18044) | 18044..18970 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| QR684_RS23190 (19528) | 19528..19746 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QR684_RS23195 (19748) | 19748..20053 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QR684_RS23200 (20054) | 20054..20860 | + | 807 | WP_000016969.1 | site-specific integrase | - |
| QR684_RS23205 (21040) | 21040..21684 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QR684_RS23210 (21771) | 21771..22079 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QR684_RS23215 (22493) | 22493..23473 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QR684_RS23220 (23466) | 23466..23882 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QR684_RS23225 (23884) | 23884..25158 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| QR684_RS23230 (25158) | 25158..25595 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QR684_RS23235 (25592) | 25592..25840 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QR684_RS23240 (26258) | 26258..27160 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| QR684_RS23245 (27157) | 27157..27468 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| QR684_RS23250 (27545) | 27545..28228 | + | 684 | WP_000086178.1 | DNA methylase | - |
| QR684_RS23255 (28229) | 28229..28450 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| QR684_RS23260 (28410) | 28410..28896 | + | 487 | Protein_37 | DUF1380 family protein | - |
| QR684_RS23265 (28947) | 28947..29717 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| QR684_RS23270 (30135) | 30135..30560 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QR684_RS23275 (30607) | 30607..31029 | + | 423 | WP_000271725.1 | DUF1380 family protein | - |
| QR684_RS23280 (31026) | 31026..31217 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| QR684_RS23285 (31987) | 31987..32514 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| QR684_RS23290 (32572) | 32572..32805 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| QR684_RS23295 (32864) | 32864..34822 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| QR684_RS23300 (34877) | 34877..35311 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QR684_RS23305 (35308) | 35308..36027 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| QR684_RS23310 (36157) | 36157..37332 | + | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QR684_RS23315 (37779) | 37779..38279 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| QR684_RS23320 (39008) | 39008..39442 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QR684_RS23325 (39536) | 39536..39802 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QR684_RS23330 (39867) | 39867..40769 | + | 903 | WP_000038404.1 | ISNCY family transposase ISRor2 | VF |
| QR684_RS23335 (40769) | 40769..41050 | + | 282 | WP_001334682.1 | hypothetical protein | VF |
| QR684_RS23340 (41081) | 41081..41332 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| QR684_RS23345 (41913) | 41913..42761 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| QR684_RS23350 (42847) | 42847..43182 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QR684_RS23355 (43416) | 43416..43748 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QR684_RS23360 (43759) | 43759..46458 | + | 2700 | WP_001474686.1 | hypothetical protein | Relaxase |
| QR684_RS23365 (46495) | 46495..48786 | - | 2292 | WP_001289271.1 | F-type conjugative transfer protein TrbC | - |
| QR684_RS23370 (48779) | 48779..49849 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| QR684_RS23375 (49868) | 49868..51076 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (51256) | 51256..51318 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (51256) | 51256..51318 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (51256) | 51256..51318 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (51256) | 51256..51318 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QR684_RS23380 (51368) | 51368..51520 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| QR684_RS23385 (51592) | 51592..51843 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| QR684_RS23390 (52204) | 52204..52986 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| QR684_RS23395 (52983) | 52983..54005 | - | 1023 | WP_001572805.1 | IS21 family transposase IS100kyp | Transposase |
| - (54189) | 54189..54240 | - | 52 | NuclAT_1 | - | - |
| - (54189) | 54189..54240 | - | 52 | NuclAT_1 | - | - |
| - (54189) | 54189..54240 | - | 52 | NuclAT_1 | - | - |
| - (54189) | 54189..54240 | - | 52 | NuclAT_1 | - | - |
| QR684_RS23400 (54726) | 54726..54902 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| QR684_RS23405 (55294) | 55294..55503 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QR684_RS23410 (55575) | 55575..56237 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QR684_RS23415 (56308) | 56308..58476 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| QR684_RS23420 (58573) | 58573..59157 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| QR684_RS23425 (59186) | 59186..60388 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| QR684_RS23430 (60355) | 60355..60969 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| QR684_RS23435 (60969) | 60969..64013 | - | 3045 | WP_046340721.1 | IncI1-type conjugal transfer protein TraU | - |
| QR684_RS23440 (64103) | 64103..64903 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QR684_RS23445 (64887) | 64887..65075 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QR684_RS23450 (65139) | 65139..65543 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QR684_RS23455 (65594) | 65594..66121 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QR684_RS23460 (66121) | 66121..66825 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QR684_RS23465 (66825) | 66825..68114 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| QR684_RS23470 (68117) | 68117..69100 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| QR684_RS23475 (69111) | 69111..69803 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QR684_RS23480 (69800) | 69800..70147 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QR684_RS23485 (70165) | 70165..73932 | - | 3768 | WP_001141535.1 | DUF5710 domain-containing protein | - |
| QR684_RS23490 (74186) | 74186..74611 | + | 426 | WP_021514830.1 | IS66 family transposase ISEc23 | Transposase |
| QR684_RS23495 (74608) | 74608..74958 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| QR684_RS23500 (74989) | 74989..76581 | + | 1593 | WP_021514829.1 | IS66 family transposase ISEc23 | Transposase |
| QR684_RS23505 (76568) | 76568..77092 | - | 525 | WP_046340722.1 | Cardiolipin synthase A | VF |
| QR684_RS23510 (77107) | 77107..77397 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QR684_RS23515 (77394) | 77394..78542 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QR684_RS23520 (78539) | 78539..79357 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| QR684_RS23525 (79354) | 79354..79812 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QR684_RS23530 (80207) | 80207..80791 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| QR684_RS23535 (80851) | 80851..82053 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QR684_RS23540 (82139) | 82139..82963 | - | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| QR684_RS23545 (83114) | 83114..84268 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| QR684_RS23550 (85049) | 85049..86470 | - | 1422 | WP_289211204.1 | hypothetical protein | VF |
| QR684_RS23555 (86470) | 86470..87126 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QR684_RS23560 (87111) | 87111..87671 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QR684_RS23565 (87681) | 87681..88295 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QR684_RS23570 (88313) | 88313..89410 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| QR684_RS23575 (89423) | 89423..90976 | - | 1554 | WP_046340687.1 | hypothetical protein | VF |
| QR684_RS23580 (90987) | 90987..91439 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| QR684_RS23585 (91426) | 91426..92721 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| QR684_RS23590 (92714) | 92714..94396 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QR684_RS23595 (94410) | 94410..94847 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QR684_RS23600 (94847) | 94847..95914 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| QR684_RS23605 (96588) | 96588..97040 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| QR684_RS23610 (97083) | 97083..97337 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QR684_RS23615 (97605) | 97605..98171 | - | 567 | WP_000776428.1 | protein TraD | - |
| QR684_RS23620 (98185) | 98185..98868 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| QR684_RS23625 (99122) | 99122..99655 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QR684_RS23630 (100097) | 100097..100384 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QR684_RS23635 (100302) | 100302..100532 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|